Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QWI19_RS07695 Genome accession   NZ_CP129123
Coordinates   1467852..1468427 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain 6D1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1462852..1473427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS07665 dapD 1463038..1463748 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QWI19_RS07670 dapI 1463818..1464942 (+) 1125 WP_015252188.1 N-acetyldiaminopimelate deacetylase -
  QWI19_RS07675 ykuS 1465004..1465249 (+) 246 WP_003232382.1 YkuS family protein -
  QWI19_RS07680 mscT 1465286..1466089 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  QWI19_RS07685 ahpA 1466326..1466868 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  QWI19_RS07690 ykuV 1466940..1467386 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  QWI19_RS07695 rok 1467852..1468427 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  QWI19_RS07700 cse15 1468468..1469433 (-) 966 WP_044052541.1 spore protein Cse15 -
  QWI19_RS07705 mobA 1469570..1470169 (+) 600 WP_015252185.1 molybdenum cofactor guanylyltransferase -
  QWI19_RS07710 moeB 1470220..1471239 (+) 1020 WP_044052540.1 molybdopterin-synthase adenylyltransferase MoeB -
  QWI19_RS07715 glp 1471257..1472549 (+) 1293 WP_015252183.1 gephyrin-like molybdotransferase Glp -
  QWI19_RS07720 mobB 1472510..1473031 (+) 522 WP_015252182.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=851197 QWI19_RS07695 WP_003232378.1 1467852..1468427(+) (rok) [Bacillus subtilis strain 6D1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=851197 QWI19_RS07695 WP_003232378.1 1467852..1468427(+) (rok) [Bacillus subtilis strain 6D1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1