Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QWI19_RS07580 Genome accession   NZ_CP129123
Coordinates   1448653..1449117 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain 6D1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1443653..1454117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS07560 kinA 1444120..1445940 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  QWI19_RS07565 dapX 1445950..1447131 (-) 1182 WP_015252196.1 aminotransferase A -
  QWI19_RS07570 - 1447333..1447494 (-) 162 WP_003245246.1 hypothetical protein -
  QWI19_RS07575 cheV 1447698..1448609 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  QWI19_RS07580 kre 1448653..1449117 (-) 465 WP_003232406.1 YkyB family protein Regulator
  QWI19_RS07585 ykuC 1449243..1450535 (-) 1293 WP_015252195.1 MFS transporter -
  QWI19_RS07590 ltdD 1450611..1451105 (-) 495 WP_080019551.1 L,D-transpeptidase family protein -
  QWI19_RS07595 ppeE 1451162..1452022 (-) 861 WP_003232400.1 metallophosphoesterase -
  QWI19_RS07600 fadH 1452165..1452929 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=851196 QWI19_RS07580 WP_003232406.1 1448653..1449117(-) (kre) [Bacillus subtilis strain 6D1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=851196 QWI19_RS07580 WP_003232406.1 1448653..1449117(-) (kre) [Bacillus subtilis strain 6D1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1