Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   QWI19_RS06195 Genome accession   NZ_CP129123
Coordinates   1197856..1199007 (+) Length   383 a.a.
NCBI ID   WP_044052564.1    Uniprot ID   -
Organism   Bacillus subtilis strain 6D1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1192856..1204007
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS06160 yjbB 1193528..1194745 (+) 1218 WP_080019554.1 MFS transporter -
  QWI19_RS06165 yjbC 1194909..1195487 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  QWI19_RS06170 spx 1195668..1196063 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  QWI19_RS06175 yjbE 1196106..1196762 (-) 657 WP_015252355.1 TerC family protein -
  QWI19_RS06180 - 1196932..1197072 (+) 141 WP_119122854.1 hypothetical protein -
  QWI19_RS06185 mecA 1197039..1197695 (+) 657 WP_015252354.1 adaptor protein MecA Regulator
  QWI19_RS06190 - 1197690..1197812 (-) 123 WP_003245684.1 hypothetical protein -
  QWI19_RS06195 coiA 1197856..1199007 (+) 1152 WP_044052564.1 competence protein CoiA Machinery gene
  QWI19_RS06200 pepF 1199237..1201066 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  QWI19_RS06205 - 1201104..1201271 (-) 168 WP_003244944.1 hypothetical protein -
  QWI19_RS06210 spxH 1201585..1202484 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  QWI19_RS06215 bhbI 1202481..1202879 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  QWI19_RS06220 cwlQ 1203134..1203868 (-) 735 WP_033883583.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44918.04 Da        Isoelectric Point: 9.9417

>NTDB_id=851192 QWI19_RS06195 WP_044052564.1 1197856..1199007(+) (coiA) [Bacillus subtilis strain 6D1]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGVGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=851192 QWI19_RS06195 WP_044052564.1 1197856..1199007(+) (coiA) [Bacillus subtilis strain 6D1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGAGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATTCATCGGGCAGGTGTAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963