Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QWI19_RS04550 Genome accession   NZ_CP129123
Coordinates   893630..894424 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain 6D1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 888630..899424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWI19_RS04520 sxzA 889469..890500 (+) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -
  QWI19_RS04525 yfhB 890615..891496 (+) 882 WP_015252519.1 PhzF family phenazine biosynthesis isomerase -
  QWI19_RS04530 yfhC 891584..892168 (+) 585 WP_015252518.1 NAD(P)H nitroreductase -
  QWI19_RS04535 yfhD 892207..892398 (-) 192 WP_003233561.1 YfhD family protein -
  QWI19_RS04540 yfhE 892465..892575 (-) 111 WP_003223230.1 YfhE family protein -
  QWI19_RS04545 yfhF 892630..893541 (-) 912 WP_044052591.1 TIGR01777 family oxidoreductase -
  QWI19_RS04550 recX 893630..894424 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  QWI19_RS04555 yfhH 894426..894740 (+) 315 WP_003244592.1 YfhH family protein -
  QWI19_RS04560 yfhI 894883..896076 (+) 1194 WP_003243500.1 MFS transporter -
  QWI19_RS04565 sspK 896108..896260 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  QWI19_RS04570 yfhJ 896385..896654 (+) 270 WP_015252516.1 YfhJ family protein -
  QWI19_RS04575 yfhK 896799..897317 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  QWI19_RS04580 spdL 897402..897734 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  QWI19_RS04585 ephM 897721..898581 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=851179 QWI19_RS04550 WP_003243354.1 893630..894424(+) (recX) [Bacillus subtilis strain 6D1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=851179 QWI19_RS04550 WP_003243354.1 893630..894424(+) (recX) [Bacillus subtilis strain 6D1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1