Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QWD88_RS13850 Genome accession   NZ_CP129120
Coordinates   2837344..2837535 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain SRCM126718     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2832344..2842535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWD88_RS13825 (QWD88_13825) - 2832702..2833688 (-) 987 WP_029325950.1 ABC transporter ATP-binding protein -
  QWD88_RS13830 (QWD88_13830) - 2833862..2834647 (-) 786 WP_029325951.1 DUF2268 domain-containing protein -
  QWD88_RS13835 (QWD88_13835) fabF 2834730..2835968 (-) 1239 WP_032874451.1 beta-ketoacyl-ACP synthase II -
  QWD88_RS13840 (QWD88_13840) - 2835991..2836929 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  QWD88_RS13845 (QWD88_13845) - 2837097..2837315 (+) 219 WP_032874450.1 hypothetical protein -
  QWD88_RS13850 (QWD88_13850) comZ 2837344..2837535 (-) 192 WP_003155061.1 ComZ family protein Regulator
  QWD88_RS13855 (QWD88_13855) med 2837548..2838501 (-) 954 WP_007610578.1 BMP family ABC transporter substrate-binding protein Regulator
  QWD88_RS13860 (QWD88_13860) - 2838591..2839157 (-) 567 WP_032874449.1 hypothetical protein -
  QWD88_RS13865 (QWD88_13865) - 2839240..2839974 (-) 735 WP_032874448.1 hypothetical protein -
  QWD88_RS13870 (QWD88_13870) - 2840233..2840418 (+) 186 WP_032874447.1 YjzD family protein -
  QWD88_RS13875 (QWD88_13875) - 2840455..2840634 (-) 180 WP_003155070.1 YjzC family protein -
  QWD88_RS13880 (QWD88_13880) argF 2840710..2841681 (-) 972 WP_032874446.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=851125 QWD88_RS13850 WP_003155061.1 2837344..2837535(-) (comZ) [Bacillus velezensis strain SRCM126718]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=851125 QWD88_RS13850 WP_003155061.1 2837344..2837535(-) (comZ) [Bacillus velezensis strain SRCM126718]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCAATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794