Detailed information NTG0851098

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S47_RS12285
• Genome accession: NZ_CP145622
• Coordinates: 2537531..2538514 (-)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain S1-ESP-02-A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2532531..2543514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S47_RS12260 (V6S47_12260)	bcsF	2532692..2532883 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
V6S47_RS12265 (V6S47_12265)	bcsG	2532880..2534559 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
V6S47_RS12270 (V6S47_12270)	ldrD	2534646..2534753 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S47_RS12275 (V6S47_12275)	yhjV	2535229..2536500 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
V6S47_RS12280 (V6S47_12280)	dppF	2536530..2537534 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S47_RS12285 (V6S47_12285)	amiE	2537531..2538514 (-)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S47_RS12290 (V6S47_12290)	dppC	2538525..2539427 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S47_RS12295 (V6S47_12295)	dppB	2539437..2540456 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
V6S47_RS12300 (V6S47_12300)	dppA	2540763..2542370 (-)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=851098 V6S47_RS12285 WP_001540025.1 2537531..2538514(-) (amiE) [Escherichia coli strain S1-ESP-02-A]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=851098 V6S47_RS12285 WP_001540025.1 2537531..2538514(-) (amiE) [Escherichia coli strain S1-ESP-02-A]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404