Detailed information NTG0851079

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QWD88_RS02735
• Genome accession: NZ_CP129120
• Coordinates: 534626..535789 (+)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain SRCM126718
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 529626..540789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QWD88_RS02715 (QWD88_02715)	-	530066..531262 (+)	1197	WP_032876154.1	glycosyltransferase	-
QWD88_RS02720 (QWD88_02720)	-	531395..532471 (+)	1077	WP_003151382.1	MraY family glycosyltransferase	-
QWD88_RS02725 (QWD88_02725)	-	532570..533751 (-)	1182	WP_032876157.1	LCP family protein	-
QWD88_RS02730 (QWD88_02730)	-	533756..534403 (-)	648	WP_007614107.1	YigZ family protein	-
QWD88_RS02735 (QWD88_02735)	degS	534626..535789 (+)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
QWD88_RS02740 (QWD88_02740)	degU	535866..536555 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QWD88_RS02745 (QWD88_02745)	-	536653..537501 (+)	849	WP_032876160.1	DegV family protein	-
QWD88_RS02750 (QWD88_02750)	comFA	537610..538995 (+)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
QWD88_RS02755 (QWD88_02755)	-	539053..539337 (+)	285	WP_003151389.1	competence protein ComFB	-
QWD88_RS02760 (QWD88_02760)	comFC	539343..540032 (+)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
QWD88_RS02765 (QWD88_02765)	-	540106..540525 (+)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=851079 QWD88_RS02735 WP_007407484.1 534626..535789(+) (degS) [Bacillus velezensis strain SRCM126718]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=851079 QWD88_RS02735 WP_007407484.1 534626..535789(+) (degS) [Bacillus velezensis strain SRCM126718]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951