Detailed information NTG0851075

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QWD88_RS01785
• Genome accession: NZ_CP129120
• Coordinates: 348046..349191 (-)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM126718
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 343046..354191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QWD88_RS01760 (QWD88_01760)	-	343329..343762 (+)	434	Protein_347	hypothetical protein	-
QWD88_RS01765 (QWD88_01765)	-	343787..345859 (-)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
QWD88_RS01770 (QWD88_01770)	speE	346059..346889 (+)	831	WP_003151052.1	spermidine synthase	-
QWD88_RS01775 (QWD88_01775)	speB	346948..347820 (+)	873	WP_032875884.1	agmatinase	-
QWD88_RS01780 (QWD88_01780)	-	347943..348062 (-)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
QWD88_RS01785 (QWD88_01785)	rapF	348046..349191 (-)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
QWD88_RS01790 (QWD88_01790)	-	349422..350777 (+)	1356	WP_032875887.1	YncE family protein	-
QWD88_RS01795 (QWD88_01795)	-	350817..352193 (+)	1377	WP_032875890.1	YncE family protein	-
QWD88_RS01800 (QWD88_01800)	-	352200..352712 (-)	513	Protein_355	bacteriocin biosynthesis protein AlbG	-
QWD88_RS01805 (QWD88_01805)	-	352866..353294 (+)	429	WP_032869448.1	DUF1934 domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=851075 QWD88_RS01785 WP_074534220.1 348046..349191(-) (rapF) [Bacillus velezensis strain SRCM126718]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=851075 QWD88_RS01785 WP_074534220.1 348046..349191(-) (rapF) [Bacillus velezensis strain SRCM126718]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541