Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   QR721_RS07590 Genome accession   NZ_CP129113
Coordinates   1451349..1453094 (-) Length   581 a.a.
NCBI ID   WP_348025601.1    Uniprot ID   -
Organism   Aciduricibacillus chroicocephali strain 44XB     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1446349..1458094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QR721_RS07565 (QR721_07555) - 1446705..1446938 (+) 234 WP_348025587.1 DUF2627 domain-containing protein -
  QR721_RS07570 (QR721_07560) - 1447005..1448351 (+) 1347 WP_348025589.1 aspartate kinase -
  QR721_RS07575 (QR721_07565) - 1448469..1448762 (+) 294 WP_348025591.1 hypothetical protein -
  QR721_RS07580 (QR721_07570) spo0A 1448992..1449777 (-) 786 WP_348025593.1 sporulation transcription factor Spo0A -
  QR721_RS07585 (QR721_07575) spoIVB 1450004..1451209 (-) 1206 WP_348025596.1 SpoIVB peptidase -
  QR721_RS07590 (QR721_07580) recN 1451349..1453094 (-) 1746 WP_348025601.1 DNA repair protein RecN Machinery gene
  QR721_RS07595 (QR721_07585) argR 1453119..1453568 (-) 450 WP_348025603.1 arginine repressor -
  QR721_RS07600 (QR721_07590) - 1453589..1454404 (-) 816 WP_348025605.1 TlyA family RNA methyltransferase -
  QR721_RS07605 (QR721_07595) - 1454420..1456189 (-) 1770 WP_348025607.1 1-deoxy-D-xylulose-5-phosphate synthase -
  QR721_RS07610 (QR721_07600) - 1456521..1457405 (-) 885 WP_348025609.1 polyprenyl synthetase family protein -
  QR721_RS07615 (QR721_07605) - 1457407..1457640 (-) 234 WP_348025611.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65685.01 Da        Isoelectric Point: 4.7315

>NTDB_id=850987 QR721_RS07590 WP_348025601.1 1451349..1453094(-) (recN) [Aciduricibacillus chroicocephali strain 44XB]
MLAELSIQDFAIIDKTSVTFQEGLTVLTGETGAGKSIIIDAIQLLAGGRGSVEFVRHGAKKAEIEGLFLIDRDDHPIYEA
GSAYGVEISDGMAVLQRTITSGGKSICRVNGKLVTLAILREFGKTLIDIHSQHETQSLMEPDNHIELLDAFRPEQISVAK
EEYRKLYERLTELKLRYKSWSKNEQEMSHRQDLLAFQKKELEQAELQPNEDVELENERNRLANFEKVHKSLQTAYNALYG
EQRGIEWVRIAEQALQEQQDADEFISQKAEALSNAYYAIEELSYDIRNYSDQMQYDEGRLNDIEARLDEISRLKRKYGST
VNEMLEYLAKVEEELEQITNKDVHLNELENEIRELTHDAFLEAKHLHEIRSAAAAELMVAIHEELQGLYLEKAKFVIRFN
PEWHDTDAQILEALQTGSARLNANGFDQVQFLISANPGEPPKELNKVASGGELSRIMLALKNIFARHQGVTSVIFDEVDT
GVSGRVAQAIAEKIFEISKASQVLCITHLPQVAAMSDTHKLISKTQTDERTETSVRELNTDEKIDELSRMITGASLTDTA
KIHAKEMLELANHFKLKTAES

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=850987 QR721_RS07590 WP_348025601.1 1451349..1453094(-) (recN) [Aciduricibacillus chroicocephali strain 44XB]
ATGCTTGCTGAGTTGTCCATACAGGATTTTGCGATCATTGATAAAACATCCGTTACTTTTCAGGAAGGTTTAACCGTACT
AACTGGAGAAACAGGTGCGGGGAAATCAATTATTATTGATGCCATACAATTGCTTGCTGGAGGCCGCGGTTCAGTTGAAT
TTGTCCGGCATGGTGCAAAGAAGGCAGAAATCGAAGGCCTGTTCCTTATTGACAGGGATGATCATCCAATTTATGAGGCG
GGGTCTGCTTACGGTGTTGAGATTTCGGATGGGATGGCTGTTCTGCAGCGTACAATCACTTCTGGCGGAAAAAGCATATG
CAGAGTAAATGGAAAGCTTGTTACTCTGGCGATTCTACGTGAGTTTGGAAAAACGCTCATTGATATCCATAGTCAGCATG
AGACGCAGTCTTTAATGGAACCTGACAACCATATTGAACTGCTTGACGCTTTTCGGCCTGAACAGATCAGCGTGGCGAAG
GAAGAATACAGAAAGCTGTATGAACGCTTAACCGAGCTAAAACTCCGTTATAAAAGCTGGAGTAAAAATGAACAGGAAAT
GAGTCATCGCCAAGATTTGCTCGCTTTCCAAAAGAAAGAGCTTGAACAAGCAGAACTCCAGCCAAATGAAGATGTGGAAT
TGGAGAATGAACGTAACAGGCTCGCCAACTTCGAAAAGGTTCATAAAAGTTTGCAGACGGCTTACAATGCGCTGTATGGA
GAGCAAAGGGGAATTGAATGGGTACGCATAGCGGAACAGGCTCTTCAGGAACAGCAGGATGCTGATGAGTTTATTTCTCA
AAAAGCTGAAGCACTGTCCAATGCCTATTATGCAATTGAAGAACTTTCCTATGATATCCGTAATTATAGTGACCAGATGC
AATATGATGAAGGACGTCTCAATGATATAGAAGCACGTTTAGATGAAATAAGCCGCTTGAAGCGAAAGTACGGATCTACT
GTAAATGAAATGTTGGAATATCTGGCAAAGGTTGAAGAAGAACTGGAACAGATCACAAATAAAGATGTCCATCTAAATGA
ACTTGAAAATGAAATTCGGGAGCTTACGCATGATGCGTTCCTTGAAGCTAAACATTTGCATGAAATCCGATCGGCTGCAG
CTGCGGAATTAATGGTGGCCATTCATGAAGAACTTCAAGGTCTCTATCTTGAGAAAGCGAAGTTCGTTATACGGTTCAAT
CCGGAATGGCATGATACGGACGCGCAGATTCTTGAAGCGCTTCAAACCGGTTCAGCAAGACTGAACGCCAATGGATTTGA
TCAGGTACAGTTTCTAATTTCAGCTAACCCTGGTGAACCTCCAAAAGAATTGAACAAAGTTGCATCTGGGGGAGAACTGT
CACGGATCATGCTTGCGCTCAAAAATATTTTTGCAAGACATCAAGGTGTGACAAGTGTAATTTTTGACGAAGTGGATACC
GGTGTAAGTGGTAGGGTAGCACAAGCAATTGCAGAGAAAATTTTCGAGATTTCTAAAGCATCACAAGTTCTATGCATTAC
ACATTTGCCACAAGTTGCTGCTATGTCGGATACGCATAAGTTAATCAGTAAGACGCAAACAGATGAACGGACTGAAACAT
CTGTCAGAGAGCTGAACACAGATGAAAAAATCGATGAATTGAGCCGAATGATTACAGGTGCTTCTTTAACGGATACTGCA
AAAATCCATGCTAAAGAAATGCTTGAGCTTGCAAATCATTTTAAATTGAAAACGGCTGAAAGCTGA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-526)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

52.604

99.139

0.522