Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QR721_RS02330 Genome accession   NZ_CP129113
Coordinates   442447..443400 (+) Length   317 a.a.
NCBI ID   WP_348028801.1    Uniprot ID   -
Organism   Aciduricibacillus chroicocephali strain 44XB     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 437447..448400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QR721_RS02305 (QR721_02305) - 438077..439060 (+) 984 WP_348028791.1 response regulator transcription factor -
  QR721_RS02310 (QR721_02310) - 439225..440076 (+) 852 WP_348028793.1 ABC transporter ATP-binding protein -
  QR721_RS02315 (QR721_02315) - 440073..440768 (+) 696 WP_348028795.1 ABC transporter permease -
  QR721_RS02320 (QR721_02320) - 440864..441316 (+) 453 WP_348028797.1 DUF2188 domain-containing protein -
  QR721_RS02325 (QR721_02325) - 441366..442229 (+) 864 WP_348028799.1 MBL fold metallo-hydrolase -
  QR721_RS02330 (QR721_02330) ceuB 442447..443400 (+) 954 WP_348028801.1 ABC transporter permease Machinery gene
  QR721_RS02335 (QR721_02335) - 443390..444340 (+) 951 WP_348028803.1 iron chelate uptake ABC transporter family permease subunit -
  QR721_RS02340 (QR721_02340) - 444334..445089 (+) 756 WP_348028805.1 ATP-binding cassette domain-containing protein -
  QR721_RS02345 (QR721_02345) - 445270..446232 (+) 963 WP_348028807.1 siderophore ABC transporter substrate-binding protein -
  QR721_RS02350 (QR721_02350) - 446298..447155 (-) 858 WP_348028809.1 DUF4097 family beta strand repeat-containing protein -
  QR721_RS02355 (QR721_02355) - 447142..447702 (-) 561 WP_348028811.1 DUF1700 domain-containing protein -
  QR721_RS02360 (QR721_02360) - 447689..448018 (-) 330 WP_348028813.1 PadR family transcriptional regulator -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34803.04 Da        Isoelectric Point: 10.0721

>NTDB_id=850975 QR721_RS02330 WP_348028801.1 442447..443400(+) (ceuB) [Aciduricibacillus chroicocephali strain 44XB]
MKLRYLVVALIIFSVVSIFLGVSDISILDVFHLNADQRKVLIISRLPRLASILIAGMSMSICGLIMQQLSRNKFVSPTTA
GTLDSAKLGILVSMMIFTSASPIQKMAFSFLFALAGTFAFMKILDHVKFKDAVFIPLVGLMFGNIIGSISSFIGYRYDLI
QNMASWMLGDFSMVLSGRYELMYISIPLLILAFIYANKFTIAGMGEDFSKNLGLNYRQIVNLGLIIVALITASVVLSVGV
IPFLGLIIPNIVTIYQGDNLKKSLAHTALLGANFVLVCDIIGRIVIYPYEVPISLTVGVIGSGIFIYLLLRRKKYGL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=850975 QR721_RS02330 WP_348028801.1 442447..443400(+) (ceuB) [Aciduricibacillus chroicocephali strain 44XB]
ATGAAACTACGTTATCTTGTTGTAGCACTCATCATCTTTTCCGTGGTATCCATCTTCCTGGGCGTTTCGGATATTTCCAT
TCTAGATGTATTCCATCTGAATGCGGATCAGAGAAAAGTTCTGATAATTAGCCGATTGCCAAGACTTGCGAGCATTCTAA
TTGCGGGCATGAGCATGAGTATCTGCGGTTTGATCATGCAGCAGCTGAGCCGGAATAAATTCGTATCTCCGACAACAGCA
GGTACGCTTGATTCAGCTAAGCTGGGCATTCTCGTTTCAATGATGATTTTCACATCGGCAAGTCCGATTCAGAAAATGGC
TTTCTCATTTTTGTTTGCGCTTGCAGGTACGTTTGCTTTCATGAAGATTCTGGACCACGTCAAATTTAAAGATGCCGTAT
TCATTCCGCTCGTCGGATTGATGTTCGGTAATATTATTGGATCAATTTCTTCTTTTATTGGCTATCGTTATGATTTGATT
CAGAACATGGCTTCCTGGATGCTTGGAGATTTTTCCATGGTACTCAGCGGGCGGTACGAGCTTATGTATATCAGTATCCC
TTTACTCATCCTTGCTTTCATATATGCCAATAAGTTCACGATTGCCGGCATGGGTGAAGACTTCTCCAAAAATCTCGGAC
TTAATTACAGGCAGATTGTGAACCTCGGACTCATTATCGTCGCATTGATTACAGCTTCTGTCGTGTTGAGTGTTGGGGTC
ATTCCATTCCTTGGATTAATCATTCCGAATATCGTTACAATTTATCAAGGGGACAATTTGAAGAAGAGTCTGGCCCATAC
AGCTTTGCTTGGTGCCAATTTCGTACTTGTCTGTGACATTATAGGCAGGATAGTGATCTATCCATATGAAGTTCCAATCA
GTCTGACCGTCGGGGTAATTGGCAGCGGAATCTTCATTTATCTGTTGCTAAGGAGAAAGAAATATGGGCTATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536