Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | QU610_RS07300 | Genome accession | NZ_CP129105 |
| Coordinates | 1513392..1513967 (+) | Length | 191 a.a. |
| NCBI ID | WP_137296119.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain HP45k | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1508392..1518967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QU610_RS07275 (QU610_07275) | uvrD | 1509083..1511128 (+) | 2046 | WP_170961784.1 | DNA helicase UvrD | - |
| QU610_RS07280 (QU610_07280) | flgA | 1511125..1511781 (+) | 657 | WP_137296121.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| QU610_RS07285 (QU610_07285) | - | 1511791..1512354 (+) | 564 | WP_075711436.1 | UbiX family flavin prenyltransferase | - |
| QU610_RS07290 (QU610_07290) | coaD | 1512354..1512827 (+) | 474 | WP_001169276.1 | pantetheine-phosphate adenylyltransferase | - |
| QU610_RS07295 (QU610_07295) | tmk | 1512829..1513404 (+) | 576 | WP_137296120.1 | dTMP kinase | - |
| QU610_RS07300 (QU610_07300) | comFC | 1513392..1513967 (+) | 576 | WP_137296119.1 | ComF family protein | Machinery gene |
| QU610_RS07305 (QU610_07305) | - | 1514000..1516039 (+) | 2040 | WP_137296118.1 | N-6 DNA methylase | - |
| QU610_RS07310 (QU610_07310) | - | 1516036..1517229 (+) | 1194 | WP_137296117.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21348.90 Da Isoelectric Point: 9.0978
>NTDB_id=850876 QU610_RS07300 WP_137296119.1 1513392..1513967(+) (comFC) [Helicobacter pylori strain HP45k]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEVEELIKSKYALIGSRILPLLSQKAGAEFVRILQEQG
LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEVEELIKSKYALIGSRILPLLSQKAGAEFVRILQEQG
LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=850876 QU610_RS07300 WP_137296119.1 1513392..1513967(+) (comFC) [Helicobacter pylori strain HP45k]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTAAACGATCTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAGTAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAGAATCTTACAAGAACAAGGC
TTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCGGGGAAAAGCTTAG
AATTTCGCGCCAACAACCCACGGGATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACGCATTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTAAACGATCTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAGTAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAGAATCTTACAAGAACAAGGC
TTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCGGGGAAAAGCTTAG
AATTTCGCGCCAACAACCCACGGGATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACGCATTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
96.335 |
100 |
0.963 |