Detailed information NTG0850875

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: QU610_RS07040
• Genome accession: NZ_CP129105
• Coordinates: 1453230..1454669 (+)
• Length: 479 a.a.
• NCBI ID: WP_137296152.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain HP45k
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1448230..1459669

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QU610_RS07020 (QU610_07020)	glmS	1448865..1450658 (-)	1794	WP_137296154.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
QU610_RS07025 (QU610_07025)	-	1450659..1450898 (-)	240	WP_000461849.1	DUF2443 family protein	-
QU610_RS07030 (QU610_07030)	-	1450945..1451481 (-)	537	WP_137296156.1	purine-nucleoside phosphorylase	-
QU610_RS07035 (QU610_07035)	dnaA	1451634..1453001 (+)	1368	WP_137296153.1	chromosomal replication initiator protein DnaA	-
QU610_RS07040 (QU610_07040)	comH	1453230..1454669 (+)	1440	WP_137296152.1	competence protein	Machinery gene
QU610_RS07050 (QU610_07050)	-	1454849..1455601 (+)	753	WP_000767544.1	exodeoxyribonuclease III	-
QU610_RS07055 (QU610_07055)	-	1455598..1456233 (-)	636	WP_127943270.1	outer membrane protein	-
QU610_RS07060 (QU610_07060)	-	1456237..1456584 (-)	348	WP_137296151.1	hypothetical protein	-
QU610_RS07065 (QU610_07065)	recG	1456666..1458537 (+)	1872	WP_137296150.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54981.88 Da
• Isoelectric Point: 6.6391

>NTDB_id=850875 QU610_RS07040 WP_137296152.1 1453230..1454669(+) (comH) [Helicobacter pylori strain HP45k]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHAHQMPSLNAPMQKPQNKPHSSQQSPQNFSYPESKLGSKNSKNSLLQPL
ITPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSNADIDENNENNENKDSVEKQVIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSHAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=850875 QU610_RS07040 WP_137296152.1 1453230..1454669(+) (comH) [Helicobacter pylori strain HP45k]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACTCACATATCCACTGCAATCGTCTATCAACCTCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACGCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
ATAACTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTG
ATGAAAACAATGAAAACAATGAGAATAAAGATAGTGTGGAAAAACAAGTGATTAGAGATCCCAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCCACGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACGATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCCAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.451	100	0.965