Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   QVH38_RS07430 Genome accession   NZ_CP129027
Coordinates   1599144..1599770 (+) Length   208 a.a.
NCBI ID   WP_033145121.1    Uniprot ID   A0A263VSI0
Organism   Enterobacter asburiae strain RG1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1594144..1604770
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QVH38_RS07410 (QVH38_07410) - 1594544..1596304 (-) 1761 WP_094934908.1 Lon protease family protein -
  QVH38_RS07415 (QVH38_07415) matP 1596491..1596943 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  QVH38_RS07420 (QVH38_07420) ompA 1597007..1598062 (-) 1056 WP_023311028.1 porin OmpA -
  QVH38_RS07425 (QVH38_07425) sulA 1598417..1598926 (-) 510 WP_033145120.1 SOS-induced cell division inhibitor SulA -
  QVH38_RS07430 (QVH38_07430) sxy/tfoX 1599144..1599770 (+) 627 WP_033145121.1 TfoX/Sxy family DNA transformation protein Regulator
  QVH38_RS07435 (QVH38_07435) yccS 1599727..1601889 (-) 2163 WP_094934909.1 YccS family putative transporter -
  QVH38_RS07440 (QVH38_07440) - 1601909..1602355 (-) 447 WP_023311032.1 YccF domain-containing protein -
  QVH38_RS07445 (QVH38_07445) helD 1602479..1604533 (+) 2055 WP_094934910.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23876.44 Da        Isoelectric Point: 9.4588

>NTDB_id=850729 QVH38_RS07430 WP_033145121.1 1599144..1599770(+) (sxy/tfoX) [Enterobacter asburiae strain RG1]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=850729 QVH38_RS07430 WP_033145121.1 1599144..1599770(+) (sxy/tfoX) [Enterobacter asburiae strain RG1]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAGGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A263VSI0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567