Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LC087_RS01610 Genome accession   NZ_CP129013
Coordinates   313784..314452 (+) Length   222 a.a.
NCBI ID   WP_226538762.1    Uniprot ID   -
Organism   Bacillus carboniphilus strain SaN35-3     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 308784..319452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LC087_RS01580 (LC087_01580) opp3C 308829..309860 (+) 1032 WP_226538756.1 oligopeptide ABC transporter permease -
  LC087_RS01585 (LC087_01585) - 309880..310921 (+) 1042 Protein_296 ABC transporter ATP-binding protein -
  LC087_RS01590 (LC087_01590) - 310927..311859 (+) 933 WP_226538758.1 ABC transporter ATP-binding protein -
  LC087_RS01595 (LC087_01595) - 311938..312114 (-) 177 WP_226538759.1 hypothetical protein -
  LC087_RS01600 (LC087_01600) spxA 312355..312750 (+) 396 WP_226538760.1 transcriptional regulator SpxA -
  LC087_RS01605 (LC087_01605) - 312801..313469 (-) 669 WP_226538761.1 TerC family protein -
  LC087_RS01610 (LC087_01610) mecA 313784..314452 (+) 669 WP_226538762.1 adaptor protein MecA Regulator
  LC087_RS01615 (LC087_01615) - 314560..314742 (+) 183 WP_226538763.1 H-type small acid-soluble spore protein -
  LC087_RS01620 (LC087_01620) - 315007..316080 (+) 1074 WP_371932639.1 competence protein CoiA -
  LC087_RS01625 (LC087_01625) pepF 316161..317980 (+) 1820 Protein_304 oligoendopeptidase F -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 26207.97 Da        Isoelectric Point: 3.8876

>NTDB_id=850503 LC087_RS01610 WP_226538762.1 313784..314452(+) (mecA) [Bacillus carboniphilus strain SaN35-3]
MDIERINENTVKFYVSYVDIEDRGFNREEIWYDRERSEELFWDMMDEISETEGFKIEGPLWIQVHAMDKGLEVVVTRAQV
SKDGQKLELPIADDKLKSVPVDENIDSILNKYFNTSSDTEEDIEESDQEQLDIMLIFDDFEDLISLAKLSLEGFNNSLFS
YNDKYYLYIEFNDEDDDDWIEDQLSRLLEFGSESRITVHRLLEYGKMIVEDGALSQIKQHFS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=850503 LC087_RS01610 WP_226538762.1 313784..314452(+) (mecA) [Bacillus carboniphilus strain SaN35-3]
ATGGATATTGAACGTATTAATGAAAATACTGTAAAGTTTTATGTTTCATATGTCGATATAGAAGACCGAGGATTTAATCG
TGAAGAAATATGGTATGATCGCGAAAGAAGTGAAGAGTTGTTTTGGGATATGATGGATGAAATTTCTGAAACAGAAGGAT
TTAAAATTGAAGGGCCCCTATGGATTCAGGTACATGCCATGGATAAAGGACTTGAAGTGGTTGTAACAAGAGCTCAAGTT
TCAAAAGATGGACAAAAATTAGAGCTACCGATTGCAGATGACAAGCTAAAGTCTGTACCAGTAGATGAAAATATTGATTC
AATACTAAATAAATACTTTAACACTTCATCAGATACTGAAGAGGACATAGAAGAATCTGATCAAGAACAGTTAGATATTA
TGCTCATATTTGATGACTTTGAAGATTTAATTTCATTAGCTAAATTATCTTTAGAGGGATTTAATAACTCTCTATTTTCA
TATAATGACAAGTATTATCTTTATATCGAGTTTAACGATGAAGACGATGATGATTGGATTGAAGATCAATTAAGTCGCTT
ATTAGAGTTTGGAAGTGAATCTCGAATAACTGTTCATCGGCTCCTAGAATACGGAAAAATGATCGTAGAAGATGGTGCTC
TTTCACAAATAAAGCAGCACTTTTCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.502

100

0.568