Detailed information NTG0850401

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: QTA68_RS06045
• Genome accession: NZ_CP129005
• Coordinates: 1189230..1191830 (+)
• Length: 866 a.a.
• NCBI ID: WP_016122101.1
• Uniprot ID: -
• Organism: Bacillus cereus strain lycx
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1184230..1196830

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTA68_RS06005 (QTA68_06005)	-	1184230..1184763 (+)	534	WP_011040108.1	hypothetical protein	-
QTA68_RS06010 (QTA68_06010)	prsA	1184994..1185851 (-)	858	WP_139849502.1	peptidylprolyl isomerase PrsA	-
QTA68_RS06015 (QTA68_06015)	-	1185981..1186112 (-)	132	WP_001120851.1	DUF3941 domain-containing protein	-
QTA68_RS06020 (QTA68_06020)	-	1186213..1187070 (+)	858	WP_000364437.1	YitT family protein	-
QTA68_RS06025 (QTA68_06025)	-	1187096..1187293 (-)	198	WP_000527407.1	DUF3813 domain-containing protein	-
QTA68_RS06030 (QTA68_06030)	-	1187294..1187434 (-)	141	WP_000516816.1	hypothetical protein	-
QTA68_RS06035 (QTA68_06035)	-	1187540..1188349 (-)	810	WP_001041232.1	Cof-type HAD-IIB family hydrolase	-
QTA68_RS06040 (QTA68_06040)	-	1188841..1189020 (+)	180	WP_000531421.1	YjzC family protein	-
QTA68_RS06045 (QTA68_06045)	clpC	1189230..1191830 (+)	2601	WP_016122101.1	ATP-dependent chaperone ClpB	Regulator
QTA68_RS06050 (QTA68_06050)	-	1191868..1192050 (-)	183	WP_001211116.1	YjzD family protein	-
QTA68_RS06055 (QTA68_06055)	-	1192207..1192941 (+)	735	WP_139849500.1	alpha/beta hydrolase	-
QTA68_RS06060 (QTA68_06060)	-	1192971..1193843 (+)	873	WP_139849499.1	NAD(P)-dependent oxidoreductase	-
QTA68_RS06065 (QTA68_06065)	comZ	1193898..1194074 (+)	177	WP_001986215.1	ComZ family protein	Regulator
QTA68_RS06070 (QTA68_06070)	fabH	1194483..1195415 (+)	933	WP_001100547.1	beta-ketoacyl-ACP synthase III	-
QTA68_RS06075 (QTA68_06075)	fabF	1195446..1196684 (+)	1239	WP_000412656.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97430.39 Da
• Isoelectric Point: 5.1561

>NTDB_id=850401 QTA68_RS06045 WP_016122101.1 1189230..1191830(+) (clpC) [Bacillus cereus strain lycx]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTIHLLFALLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
VGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=850401 QTA68_RS06045 WP_016122101.1 1189230..1191830(+) (clpC) [Bacillus cereus strain lycx]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAGGTAGATACTATTCATCTATTATTTGCATTATTAGAAGAGCAAGATGGGTTAGCGGTACGTATATTTCAAAAAATGA
ATGTTGATATAGAAGCATTAAAGCAAGGTGCTGAAAGTTTAATTAAAAAGAAACCTTCTGTAACGGGGAGCGGTGCAGAA
GTTGGAAAATTGTATGTAACGAGCGCTCTGCAACAACTGCTTGTAAGAGCAGGGAAAGAAGCAGAAAAACTGCAGGATGA
TTACATTTCAGTAGAACATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATAAATCAATTATTTACAAGATTGCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACGAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTGGCGGAAGTGAGAGCAGGGAAAATTGATCCTGTAATCGGCCGTGA
TAGTGAAATACGACGTGTAATCCGTATTCTTTCACGTAAAACGAAAAACAATCCGGTTTTAATTGGGGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGGCTAGCCCAGCGTATTGTGAAAAAGGATGTACCTGAAGGATTGAAAGATAGAACGATT
TTTGCGTTAGATATGAGTGCACTCGTAGCTGGTGCGAAATTCCGTGGTGAGTTCGAAGAGCGTCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGCATTTTATTATTCATTGATGAACTTCATACAATAGTTGGAGCTGGTAAAACAGAAG
GAGCCATGGATGCAGGAAATATGTTAAAACCGATGCTTGCACGTGGTGAACTGCATTGTATTGGAGCCACAACACTAGAT
GAATATCGCAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAGCCAACTGTTGA
AGATACGATTTCCATTTTACGTGGATTAAAAGAACGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGTGCGATTG
TAGCAGCATCTGTTTTATCAGATCGATATATTTCAGATCGCTTCTTACCAGATAAAGCAATTGATCTTGTTGACGAAGCG
TGTGCAACAATTCGTACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT
TGAAGAAGCGGCTCTTGGGAAAGAAACGGATCGTGGTAGCCAAGAGCGTCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTGGCATGAGAGCGAAATGGGAGAAAGAAAAAGAAGACATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAACGTTTGCGTCGTGAATTAGAAGAAGCAGAAGGCAATTACGATTTAAATAAAGCAGCCGAACTTCGTCACGG
GAAAATTCCCGCAATTGAAAAAGAGTTAAAAGAAGCGGAAGAAATGGGCGCGCATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCAGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCGAAACTCGTGGAAGGT
GAACGCGAGAAATTATTACGCTTAGAGCAAATCTTATCAGAGCGTGTCATCGGACAAGAGGAAGCAGTAAGCTTAGTGTC
AGACGCAGTTCTTCGTGCTCGCGCTGGTATTAAAGATCCGAACCGCCCGATTGGTTCTTTCATCTTCTTAGGACCAACAG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCCCAGTCTTTATTCGATAGTGAAGAGCAAATGATTCGCATTGACATG
TCTGAGTATATGGAGAAACACGCAGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTAGGATATGAAGAAGGCGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCATATTCCGTTGTTTTATTAGATGAAATTGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGACGCATTACAGATTCACAGGGCCGTACAGTGGACTTTAAAAATACAGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTACTAGATGGATTAGAAGAAGATGGTTCGATTAAAGAGGAATCAAGAGA
CCTTGTAATGGGGCAATTAAGAGGACATTTCCGCCCTGAATTTTTAAACCGTGTGGATGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGCATTGTTGATAAAATTGTAAAAGAACTACAAGGTCGTCTAGCTGACCGTCACATTACA
GTAGAATTAACAGATGCAGCAAAAGAATTTGTTGTGGAAGCCGGTTTTGACCCAATGTACGGAGCTCGTCCATTAAAGCG
ATACGTACAGCGTCAAGTGGAAACGAAATTAGCACGAGAATTAATTGCAGGAACAATTACTGATAATAGTCACGTAGTTG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAATAA

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• AAA lid domain (AAA_lid_9) (345-447)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.886	100	0.484
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.153	100	0.425
clpC	Lactococcus lactis subsp. cremoris KW2	47.059	82.448	0.388