Detailed information NTG0850310

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QVX78_RS17725
• Genome accession: NZ_CP128992
• Coordinates: 3581676..3582821 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ZLP-101
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3576676..3587821

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QVX78_RS17705 (QVX78_17690)	-	3577573..3578001 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
QVX78_RS17710 (QVX78_17695)	-	3578155..3578667 (+)	513	Protein_3434	bacteriocin biosynthesis protein AlbG	-
QVX78_RS17715 (QVX78_17700)	-	3578674..3580050 (-)	1377	WP_032875890.1	YncE family protein	-
QVX78_RS17720 (QVX78_17705)	-	3580090..3581445 (-)	1356	WP_032875887.1	YncE family protein	-
QVX78_RS17725 (QVX78_17710)	rapF	3581676..3582821 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
QVX78_RS17730 (QVX78_17715)	-	3582805..3582924 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
QVX78_RS17735 (QVX78_17720)	speB	3583047..3583919 (-)	873	WP_032875884.1	agmatinase	-
QVX78_RS17740 (QVX78_17725)	speE	3583978..3584808 (-)	831	WP_003151052.1	spermidine synthase	-
QVX78_RS17745 (QVX78_17730)	-	3585008..3587080 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
QVX78_RS17750 (QVX78_17735)	-	3587105..3587538 (-)	434	Protein_3442	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=850310 QVX78_RS17725 WP_074534220.1 3581676..3582821(+) (rapF) [Bacillus velezensis strain ZLP-101]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=850310 QVX78_RS17725 WP_074534220.1 3581676..3582821(+) (rapF) [Bacillus velezensis strain ZLP-101]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541