Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   QWH96_RS10500 Genome accession   NZ_CP128987
Coordinates   2101266..2101979 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NS3396     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2096266..2106979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWH96_RS10490 (QWH96_10490) treC 2097336..2098964 (-) 1629 WP_049519516.1 alpha,alpha-phosphotrehalase -
  QWH96_RS10495 (QWH96_10495) treP 2099031..2101055 (-) 2025 WP_003059974.1 PTS system trehalose-specific EIIBC component -
  QWH96_RS10500 (QWH96_10500) treR 2101266..2101979 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  QWH96_RS10505 (QWH96_10505) - 2102261..2102599 (-) 339 WP_022555235.1 helix-turn-helix domain-containing protein -
  QWH96_RS10510 (QWH96_10510) - 2102795..2103651 (+) 857 Protein_2028 VOC family protein -
  QWH96_RS10515 (QWH96_10515) yaaA 2103693..2104424 (+) 732 WP_015058128.1 peroxide stress protein YaaA -
  QWH96_RS10520 (QWH96_10520) nrdG 2104598..2105212 (-) 615 WP_003058750.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  QWH96_RS10525 (QWH96_10525) - 2105216..2105719 (-) 504 WP_065957623.1 GNAT family N-acetyltransferase -
  QWH96_RS10530 (QWH96_10530) - 2105728..2106663 (-) 936 WP_012767638.1 Gfo/Idh/MocA family oxidoreductase -
  QWH96_RS10535 (QWH96_10535) - 2106692..2106838 (-) 147 WP_003053094.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=850206 QWH96_RS10500 WP_002982243.1 2101266..2101979(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain NS3396]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=850206 QWH96_RS10500 WP_002982243.1 2101266..2101979(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain NS3396]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679