Detailed information NTG0849660

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QU579_RS14105
• Genome accession: NZ_CP128803
• Coordinates: 3071166..3072173 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain NJIFDCVp52
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3066166..3077173

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QU579_RS14085 (QU579_14325)	rplC	3066700..3067329 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
QU579_RS14090 (QU579_14330)	rpsJ	3067344..3067655 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
QU579_RS14095 (QU579_14335)	rpmE	3068113..3068334 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
QU579_RS14100 (QU579_14340)	priA	3068629..3070833 (+)	2205	WP_276466216.1	primosomal protein N'	-
QU579_RS14105 (QU579_14345)	cytR	3071166..3072173 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
QU579_RS14110 (QU579_14350)	ftsN	3072350..3072895 (+)	546	WP_053321029.1	cell division protein FtsN	-
QU579_RS14115 (QU579_14355)	hslV	3073060..3073611 (+)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
QU579_RS14120 (QU579_14360)	hslU	3073635..3074966 (+)	1332	WP_005457198.1	HslU--HslV peptidase ATPase subunit	-
QU579_RS14125 (QU579_14365)	-	3075151..3076068 (+)	918	WP_017449001.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QU579_RS14130 (QU579_14370)	rraA	3076145..3076657 (+)	513	WP_342821130.1	ribonuclease E activity regulator RraA	-
QU579_RS14135 (QU579_14375)	zapB	3076762..3077004 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=849660 QU579_RS14105 WP_005481416.1 3071166..3072173(+) (cytR) [Vibrio parahaemolyticus strain NJIFDCVp52]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=849660 QU579_RS14105 WP_005481416.1 3071166..3072173(+) (cytR) [Vibrio parahaemolyticus strain NJIFDCVp52]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTGCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCATT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTACGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GTGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGCGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATTT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTACTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904