Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QU593_RS14810 Genome accession   NZ_CP128801
Coordinates   2874738..2875697 (-) Length   319 a.a.
NCBI ID   WP_353852467.1    Uniprot ID   -
Organism   Rossellomorea marisflavi strain SRCM125375     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2869738..2880697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QU593_RS14785 (QU593_14785) - 2870256..2871005 (-) 750 WP_148985438.1 YjbA family protein -
  QU593_RS14790 (QU593_14790) - 2871108..2871872 (-) 765 WP_148985439.1 DUF2268 domain-containing putative Zn-dependent protease -
  QU593_RS14795 (QU593_14795) fabF 2871964..2873208 (-) 1245 WP_053427547.1 beta-ketoacyl-ACP synthase II -
  QU593_RS14800 (QU593_14800) - 2873258..2874190 (-) 933 WP_290031069.1 beta-ketoacyl-ACP synthase III -
  QU593_RS14805 (QU593_14805) comZ 2874559..2874741 (-) 183 WP_079515816.1 ComZ family protein Regulator
  QU593_RS14810 (QU593_14810) med 2874738..2875697 (-) 960 WP_353852467.1 BMP family ABC transporter substrate-binding protein Regulator
  QU593_RS14815 (QU593_14815) - 2875767..2876480 (-) 714 WP_290031071.1 hypothetical protein -
  QU593_RS14820 (QU593_14820) - 2876499..2877239 (-) 741 WP_056537861.1 hypothetical protein -
  QU593_RS14825 (QU593_14825) - 2877465..2877647 (+) 183 WP_053427553.1 DUF2929 family protein -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 34951.98 Da        Isoelectric Point: 4.3545

>NTDB_id=849611 QU593_RS14810 WP_353852467.1 2874738..2875697(-) (med) [Rossellomorea marisflavi strain SRCM125375]
MRFFHLSMILLLLGGCTAGSRSGEMDNAGLLVPETIDDGVWGTKGYQGLLGIQKEFDVKVYYKEGMNGDTSVRHALDEFE
KEDVNLVFGHGNEYSSIFNEVASEHKNMHLVSFNGDATEKNTTSLTFKGYAMGFFGGMTAASQTNTDRLGVIAAFFWQPE
VQGFIDGARYQNGKAEVLVEYTGHWDHSEVALDRLDGLLDQDVDVVYPAGDGYNVAVIEKLKESGRYAIGYVSDQSDLGE
TTVLTSTVQHADKLYELIAGKYTAGELESGNLEFDFQDGVISMGEFSPVVPAGFKTEMNQHIKAYVDTGKLPNGKEPPL

Nucleotide


Download         Length: 960 bp        

>NTDB_id=849611 QU593_RS14810 WP_353852467.1 2874738..2875697(-) (med) [Rossellomorea marisflavi strain SRCM125375]
ATGAGATTTTTTCACTTGTCGATGATCCTTTTGCTGCTGGGGGGCTGTACTGCCGGTAGCCGGTCAGGAGAGATGGACAA
TGCTGGCCTGCTGGTCCCGGAAACGATCGATGATGGCGTTTGGGGGACAAAAGGGTATCAAGGTCTTTTGGGCATCCAGA
AAGAGTTCGATGTGAAGGTTTACTATAAAGAGGGAATGAATGGAGACACGTCGGTCCGGCATGCCCTGGATGAATTTGAA
AAAGAGGACGTCAATCTTGTGTTCGGCCATGGGAATGAATACTCTTCCATATTCAATGAGGTGGCATCAGAGCATAAGAA
TATGCATCTGGTAAGCTTCAATGGGGACGCTACGGAGAAGAATACTACCAGCTTGACGTTCAAAGGGTACGCCATGGGGT
TTTTCGGAGGAATGACTGCTGCTTCCCAGACAAATACGGATCGACTCGGCGTCATTGCAGCCTTTTTTTGGCAGCCGGAA
GTCCAGGGGTTCATTGATGGAGCCAGATACCAAAATGGTAAAGCCGAGGTCCTGGTCGAATATACGGGCCACTGGGACCA
CTCGGAGGTTGCACTCGATAGGCTCGACGGGCTTCTCGATCAAGACGTGGACGTTGTATATCCAGCAGGGGACGGGTATA
ATGTGGCTGTAATTGAAAAACTCAAGGAATCAGGTCGCTATGCCATCGGGTATGTGAGCGACCAGTCAGACCTTGGGGAA
ACAACGGTGTTGACGAGTACGGTCCAGCATGCCGACAAGCTGTATGAACTGATTGCCGGGAAATATACTGCCGGTGAACT
TGAGTCTGGTAATCTTGAATTCGATTTCCAGGACGGGGTCATCTCCATGGGAGAATTCAGCCCTGTCGTCCCTGCCGGAT
TCAAGACCGAGATGAACCAGCATATCAAAGCGTATGTCGATACCGGAAAACTACCCAACGGAAAGGAGCCGCCATTATGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-313)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

50.482

97.492

0.492