Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QU662_RS09995 Genome accession   NZ_CP128651
Coordinates   2026472..2027140 (-) Length   222 a.a.
NCBI ID   WP_016930642.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain F0718     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2021472..2032140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QU662_RS09980 (QU662_09980) - 2022650..2024641 (-) 1992 WP_016930645.1 ABC transporter permease -
  QU662_RS09985 (QU662_09985) - 2024643..2025392 (-) 750 WP_016930644.1 ABC transporter ATP-binding protein -
  QU662_RS09990 (QU662_09990) braS 2025573..2026469 (-) 897 WP_016930643.1 sensor histidine kinase Regulator
  QU662_RS09995 (QU662_09995) braR 2026472..2027140 (-) 669 WP_016930642.1 response regulator transcription factor Regulator
  QU662_RS10000 (QU662_10000) - 2027170..2027334 (-) 165 WP_016930641.1 hypothetical protein -
  QU662_RS10005 (QU662_10005) - 2027520..2027690 (-) 171 WP_011274728.1 hypothetical protein -
  QU662_RS10010 (QU662_10010) - 2028089..2029564 (+) 1476 WP_016930640.1 alkaline phosphatase -
  QU662_RS10015 (QU662_10015) - 2029654..2030601 (-) 948 WP_016930639.1 LCP family protein -
  QU662_RS10020 (QU662_10020) - 2030621..2030821 (-) 201 Protein_1926 DegT/DnrJ/EryC1/StrS family aminotransferase -
  QU662_RS10025 (QU662_10025) - 2031240..2031341 (-) 102 WP_016930637.1 SE2200 family small protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25695.51 Da        Isoelectric Point: 4.6536

>NTDB_id=849513 QU662_RS09995 WP_016930642.1 2026472..2027140(-) (braR) [Staphylococcus haemolyticus strain F0718]
MKVFIVEDDFIIAESLEQELSKWNYEVIVAKQFDNIIDVFHANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEVTVKNCKLVVDEATLYHEDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=849513 QU662_RS09995 WP_016930642.1 2026472..2027140(-) (braR) [Staphylococcus haemolyticus strain F0718]
ATGAAAGTATTCATCGTGGAAGATGATTTTATCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTCATGCAAATCAACCACAACTCGTATTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTACCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGACTTTATCGAGAAACCATTTAATTTATCGTTAAC
TGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAGTTACTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATTGTCTTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

99.55

0.77