Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QRA04_RS07450 Genome accession   NZ_CP128608
Coordinates   1402185..1402643 (-) Length   152 a.a.
NCBI ID   WP_000804871.1    Uniprot ID   A0A516QVQ1
Organism   Bacillus tropicus strain PUMB_55     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1397185..1407643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA04_RS07425 (QRA04_07405) - 1397316..1398857 (-) 1542 WP_000445746.1 MDR family MFS transporter -
  QRA04_RS07430 (QRA04_07410) - 1399285..1399785 (+) 501 WP_000708171.1 hypothetical protein -
  QRA04_RS07435 (QRA04_07415) - 1399817..1400050 (-) 234 WP_000939451.1 SPP1 phage holin family protein -
  QRA04_RS07440 (QRA04_07420) - 1400215..1400856 (+) 642 WP_000680832.1 diguanylate cyclase domain-containing protein -
  QRA04_RS07445 (QRA04_07425) - 1401491..1402153 (+) 663 WP_000922488.1 YkyA family protein -
  QRA04_RS07450 (QRA04_07430) kre 1402185..1402643 (-) 459 WP_000804871.1 YkyB family protein Regulator
  QRA04_RS07455 (QRA04_07435) - 1402821..1404356 (+) 1536 WP_242274881.1 Ppx/GppA family phosphatase -
  QRA04_RS07460 (QRA04_07440) - 1404465..1406573 (+) 2109 WP_410490803.1 polyphosphate kinase -
  QRA04_RS07465 (QRA04_07445) - 1406747..1406983 (-) 237 WP_000283743.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17773.49 Da        Isoelectric Point: 10.6793

>NTDB_id=849284 QRA04_RS07450 WP_000804871.1 1402185..1402643(-) (kre) [Bacillus tropicus strain PUMB_55]
MKPSQPQSQLQNQHSINRLAQSVFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=849284 QRA04_RS07450 WP_000804871.1 1402185..1402643(-) (kre) [Bacillus tropicus strain PUMB_55]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTGTTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAACCCGAAAACAACCTTATCTTTGACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACCAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A516QVQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

65.517

76.316

0.5