Detailed information NTG0849269

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: QRA04_RS01530
• Genome accession: NZ_CP128608
• Coordinates: 327850..329199 (+)
• Length: 449 a.a.
• NCBI ID: WP_242275949.1
• Uniprot ID: -
• Organism: Bacillus tropicus strain PUMB_55
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 322850..334199

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRA04_RS01510 (QRA04_01505)	-	323924..324559 (-)	636	WP_000926682.1	YigZ family protein	-
QRA04_RS01515 (QRA04_01510)	-	324799..325641 (+)	843	WP_029440995.1	DegV family protein	-
QRA04_RS01520 (QRA04_01515)	-	325815..326129 (+)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
QRA04_RS01525 (QRA04_01520)	-	326278..327723 (+)	1446	WP_410490702.1	NlpC/P60 family protein	-
QRA04_RS01530 (QRA04_01525)	comFA	327850..329199 (+)	1350	WP_242275949.1	ATP-dependent helicase ComFA	Machinery gene
QRA04_RS01535 (QRA04_01530)	-	329199..329903 (+)	705	WP_242275948.1	ComF family protein	-
QRA04_RS01540 (QRA04_01535)	cspC	330030..330227 (+)	198	WP_001990088.1	cold shock protein CspC	-
QRA04_RS01545 (QRA04_01540)	hpf	330553..331095 (+)	543	WP_000671191.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
QRA04_RS01550 (QRA04_01545)	secA	331370..333877 (+)	2508	WP_000579383.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 50897.36 Da
• Isoelectric Point: 9.6684

>NTDB_id=849269 QRA04_RS01530 WP_242275949.1 327850..329199(+) (comFA) [Bacillus tropicus strain PUMB_55]
MLAGKQLLLEELSSDLRRELSDLKKKGEVVCVQGITKNTSKYICQRCGNIEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECTVLVRGIHERNGDGELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRKGKQKGVIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTEVMVRAKKHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=849269 QRA04_RS01530 WP_242275949.1 327850..329199(+) (comFA) [Bacillus tropicus strain PUMB_55]
ATGCTTGCTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAAGGG
AGAGGTTGTATGTGTACAAGGTATAACAAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGCGCGTATTGTCGGAAGTGTATCACGATGGGGAGAGTTAGC
GAATGTACTGTACTTGTTCGCGGGATTCATGAAAGAAACGGAGACGGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGGACTGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCAGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGTAATTTCAGAAAGGGGAAACAAAA
AGGTGTTATTGTGTCAGGACGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATTGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATATTTTCGGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCTTATGGTGAGGTTGTTTATTTTCATTACGGTAAGACAGAGGT
GATGGTACGTGCGAAAAAACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (110-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.357	98.441	0.506