Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QTL84_RS07465 Genome accession   NZ_CP128559
Coordinates   1405325..1405789 (-) Length   154 a.a.
NCBI ID   WP_014417605.1    Uniprot ID   I2C4C5
Organism   Bacillus velezensis strain SH-1471     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1400325..1410789
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTL84_RS07445 - 1400806..1402626 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  QTL84_RS07450 - 1402651..1403820 (-) 1170 WP_007611083.1 aminotransferase A -
  QTL84_RS07455 - 1404021..1404182 (-) 162 WP_007409608.1 hypothetical protein -
  QTL84_RS07460 cheV 1404371..1405282 (+) 912 WP_014417604.1 chemotaxis protein CheV -
  QTL84_RS07465 kre 1405325..1405789 (-) 465 WP_014417605.1 YkyB family protein Regulator
  QTL84_RS07470 - 1405912..1407204 (-) 1293 WP_014417606.1 MFS transporter -
  QTL84_RS07475 - 1407280..1407774 (-) 495 WP_088056573.1 L,D-transpeptidase family protein -
  QTL84_RS07480 - 1407849..1408712 (-) 864 WP_014417608.1 metallophosphoesterase -
  QTL84_RS07485 fadH 1408856..1409620 (+) 765 WP_014417609.1 2,4-dienoyl-CoA reductase -
  QTL84_RS07490 - 1409734..1410282 (+) 549 WP_014417610.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.60 Da        Isoelectric Point: 10.5497

>NTDB_id=848977 QTL84_RS07465 WP_014417605.1 1405325..1405789(-) (kre) [Bacillus velezensis strain SH-1471]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=848977 QTL84_RS07465 WP_014417605.1 1405325..1405789(-) (kre) [Bacillus velezensis strain SH-1471]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTAACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C4C5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929