Detailed information NTG0848886

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QTN52_RS18925
• Genome accession: NZ_CP128551
• Coordinates: 3778931..3780076 (+)
• Length: 381 a.a.
• NCBI ID: WP_017418708.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM123441
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3773931..3785076

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTN52_RS18905 (QTN52_18905)	fnr	3774405..3775121 (-)	717	WP_017418713.1	fumarate/nitrate reduction transcriptional regulator Fnr	-
QTN52_RS18910 (QTN52_18910)	narK	3775219..3776409 (-)	1191	WP_017418712.1	nitrate transporter NarK	-
QTN52_RS18915 (QTN52_18915)	argS	3776544..3778214 (-)	1671	WP_025649385.1	arginine--tRNA ligase	-
QTN52_RS18920 (QTN52_18920)	-	3778211..3778639 (-)	429	WP_014419128.1	DUF1934 family protein	-
QTN52_RS18925 (QTN52_18925)	rapF	3778931..3780076 (+)	1146	WP_017418708.1	tetratricopeptide repeat protein	Regulator
QTN52_RS18930 (QTN52_18930)	-	3780060..3780179 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
QTN52_RS18935 (QTN52_18935)	speB	3780302..3781174 (-)	873	WP_003151054.1	agmatinase	-
QTN52_RS18940 (QTN52_18940)	speE	3781234..3782064 (-)	831	WP_017418706.1	spermidine synthase	-
QTN52_RS18945 (QTN52_18945)	-	3782264..3784336 (+)	2073	WP_017418705.1	transglycosylase domain-containing protein	-
QTN52_RS18950 (QTN52_18950)	-	3784361..3784792 (-)	432	WP_017418704.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=848886 QTN52_RS18925 WP_017418708.1 3778931..3780076(+) (rapF) [Bacillus velezensis strain SRCM123441]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=848886 QTN52_RS18925 WP_017418708.1 3778931..3780076(+) (rapF) [Bacillus velezensis strain SRCM123441]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533