Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QTN52_RS07340 Genome accession   NZ_CP128551
Coordinates   1464729..1465193 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain SRCM123441     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1459729..1470193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN52_RS07320 (QTN52_07320) - 1460209..1462029 (+) 1821 WP_017417673.1 PAS domain-containing protein -
  QTN52_RS07325 (QTN52_07325) - 1462055..1463224 (-) 1170 WP_007611083.1 aminotransferase A -
  QTN52_RS07330 (QTN52_07330) - 1463425..1463586 (-) 162 WP_007409608.1 hypothetical protein -
  QTN52_RS07335 (QTN52_07335) cheV 1463775..1464686 (+) 912 WP_134986495.1 chemotaxis protein CheV -
  QTN52_RS07340 (QTN52_07340) kre 1464729..1465193 (-) 465 WP_003154622.1 YkyB family protein Regulator
  QTN52_RS07345 (QTN52_07345) - 1465316..1466608 (-) 1293 WP_014417606.1 MFS transporter -
  QTN52_RS07350 (QTN52_07350) - 1466684..1467178 (-) 495 WP_094296114.1 L,D-transpeptidase family protein -
  QTN52_RS07355 (QTN52_07355) - 1467253..1468116 (-) 864 WP_017417676.1 metallophosphoesterase -
  QTN52_RS07360 (QTN52_07360) fadH 1468260..1469024 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  QTN52_RS07365 (QTN52_07365) - 1469138..1469686 (+) 549 WP_017417677.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=848842 QTN52_RS07340 WP_003154622.1 1464729..1465193(-) (kre) [Bacillus velezensis strain SRCM123441]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=848842 QTN52_RS07340 WP_003154622.1 1464729..1465193(-) (kre) [Bacillus velezensis strain SRCM123441]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929