Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QTN52_RS05595 Genome accession   NZ_CP128551
Coordinates   1087023..1087976 (+) Length   317 a.a.
NCBI ID   WP_017417445.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123441     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1082023..1092976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN52_RS05570 (QTN52_05570) argF 1083841..1084812 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  QTN52_RS05575 (QTN52_05575) - 1084887..1085066 (+) 180 WP_003155070.1 YjzC family protein -
  QTN52_RS05580 (QTN52_05580) - 1085103..1085288 (-) 186 WP_007409129.1 YjzD family protein -
  QTN52_RS05585 (QTN52_05585) - 1085549..1086283 (+) 735 WP_014417405.1 hypothetical protein -
  QTN52_RS05590 (QTN52_05590) - 1086366..1086932 (+) 567 WP_017417444.1 hypothetical protein -
  QTN52_RS05595 (QTN52_05595) med 1087023..1087976 (+) 954 WP_017417445.1 BMP family ABC transporter substrate-binding protein Regulator
  QTN52_RS05600 (QTN52_05600) comZ 1087989..1088180 (+) 192 WP_017417446.1 ComZ family protein Regulator
  QTN52_RS05605 (QTN52_05605) - 1088209..1088427 (-) 219 WP_007409123.1 hypothetical protein -
  QTN52_RS05610 (QTN52_05610) - 1088595..1089533 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  QTN52_RS05615 (QTN52_05615) fabF 1089556..1090794 (+) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  QTN52_RS05620 (QTN52_05620) - 1090878..1091663 (+) 786 WP_134986439.1 DUF2268 domain-containing protein -
  QTN52_RS05625 (QTN52_05625) - 1091837..1092823 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35359.98 Da        Isoelectric Point: 4.6686

>NTDB_id=848834 QTN52_RS05595 WP_017417445.1 1087023..1087976(+) (med) [Bacillus velezensis strain SRCM123441]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKNNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYLAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=848834 QTN52_RS05595 WP_017417445.1 1087023..1087976(+) (med) [Bacillus velezensis strain SRCM123441]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATTTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAAACAATGAGGTCGGCGTCATCGCCTCTTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGAGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCTGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACAGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

77.603

100

0.776