Detailed information NTG0848747

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LU664_RS07230
• Genome accession: NZ_CP128548
• Coordinates: 1585278..1587491 (+)
• Length: 737 a.a.
• NCBI ID: WP_164524237.1
• Uniprot ID: -
• Organism: Pseudomonas kurunegalensis strain NMI3456_12
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1580278..1592491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LU664_RS07205 (LU664_007205)	-	1581592..1582002 (+)	411	WP_164524236.1	hypothetical protein	-
LU664_RS07210 (LU664_007210)	-	1582154..1582777 (+)	624	WP_104835342.1	glutathione S-transferase	-
LU664_RS07215 (LU664_007215)	-	1582911..1583843 (+)	933	WP_016715124.1	ABC transporter ATP-binding protein	-
LU664_RS07220 (LU664_007220)	-	1583840..1584619 (+)	780	WP_060498742.1	ABC transporter permease	-
LU664_RS07225 (LU664_007225)	-	1584623..1585135 (-)	513	Protein_1389	DUF2062 domain-containing protein	-
LU664_RS07230 (LU664_007230)	comA	1585278..1587491 (+)	2214	WP_164524237.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LU664_RS07235 (LU664_007235)	exbB	1587882..1588517 (+)	636	WP_016391244.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
LU664_RS07240 (LU664_007240)	-	1588514..1588948 (+)	435	WP_104835340.1	biopolymer transporter ExbD	-
LU664_RS07245 (LU664_007245)	lpxK	1588948..1589949 (+)	1002	WP_060498746.1	tetraacyldisaccharide 4'-kinase	-
LU664_RS07250 (LU664_007250)	-	1589994..1590179 (+)	186	WP_003247142.1	Trm112 family protein	-
LU664_RS07255 (LU664_007255)	kdsB	1590176..1590940 (+)	765	WP_060498747.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LU664_RS07260 (LU664_007260)	-	1590940..1591404 (+)	465	WP_060498748.1	low molecular weight protein-tyrosine-phosphatase	-
LU664_RS07265 (LU664_007265)	murB	1591401..1592420 (+)	1020	WP_060498749.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 79352.31 Da
• Isoelectric Point: 10.6918

>NTDB_id=848747 LU664_RS07230 WP_164524237.1 1585278..1587491(+) (comA) [Pseudomonas kurunegalensis strain NMI3456_12]
MRTGMFALALGLLCLGFLPALPSVGWLIALAACAVASLFTRVWPLGCFLLGLCWACGSAQLALDDRLAAGLDGRTVWLEG
RVVGLPVRTAQGVRFELDAGRSRRAELPQRLQLSWFGGPPLRAGEQWRLAVTLQRPAGLSNPHGPDREAQLLARRVGATG
TVKAGQLLAPVTGGWRDALRQRLLAVEANGRTAALVALVLGDGAGLAREDWQTLQATGTVHLLVISGQHIGLVAGLLYGL
VAGLARWGWWPARLPWLPWACGLAMTAALAYAWLAGGGVPVQRACLMLAVVLLWRLRFRHLGALLPLLLALVVVLLVEPL
AALLPGFWLSFTAVATLLYCFSARLGGWRPWQAWTRAQWVIAIGLLPVLLATGLPVSLSAPLANLVAVPWISLVVLPLAL
LGTVLLPLPVVGEALLWLAGGLLDLLFRGLALVAQQRPAWMPAVLPVWAWLLVCVGALLVLLPRGVPLRGLGGVMLLALW
VPREPVPLGQVEVWQLDVGQGLAVLLRTRHHNLLYDAGPAKGDSDLGERVVLPTLRKLGVAGLDVMLVSHAHADHAGGAA
AIQRGLPVRRTIGGEALNDVPLQPCVSGERWDWDGVRFSLWRWADGQSSNDRSCVLMVEAQGERLLLAGDMEAGAERAWL
AAAETPRVDWLQSPHHGSRSSSSEAFIRATAPRGVLISRGRNNSFGHPHVQVVERYRRYGVTIHDTAVEGALRLVLGRQG
EVEGVRGQRRFWRAQLD

Nucleotide

• Length: 2214 bp

>NTDB_id=848747 LU664_RS07230 WP_164524237.1 1585278..1587491(+) (comA) [Pseudomonas kurunegalensis strain NMI3456_12]
ATGCGCACAGGGATGTTTGCGCTCGCGCTCGGGCTGTTGTGCCTGGGCTTTCTCCCCGCATTGCCATCGGTCGGATGGTT
GATCGCGCTGGCGGCCTGCGCTGTCGCCAGTCTGTTCACCCGCGTGTGGCCGTTGGGCTGCTTTCTGCTGGGCCTGTGCT
GGGCTTGCGGGTCTGCTCAGCTGGCCCTTGATGATCGCCTGGCTGCCGGCCTGGATGGCCGCACCGTGTGGCTGGAAGGG
CGGGTGGTTGGCTTGCCGGTCCGAACGGCACAAGGCGTGCGTTTCGAGCTGGACGCGGGACGCTCGCGGCGGGCCGAACT
GCCGCAGCGCCTGCAACTGAGCTGGTTCGGTGGGCCGCCCCTGCGGGCGGGCGAGCAGTGGCGGCTGGCCGTGACCCTGC
AGCGCCCGGCCGGGCTGTCGAACCCGCATGGGCCAGACCGCGAGGCGCAACTGCTGGCACGGCGGGTGGGTGCCACGGGC
ACAGTCAAGGCGGGGCAGCTGCTGGCGCCAGTAACCGGTGGTTGGCGCGATGCGCTGCGTCAGCGCTTGCTCGCAGTCGA
GGCCAATGGCCGAACGGCGGCGTTGGTGGCGCTGGTGCTAGGTGATGGGGCGGGCCTGGCCCGGGAGGACTGGCAGACGT
TGCAGGCCACCGGCACGGTGCACCTGCTGGTGATTTCTGGCCAGCACATCGGCTTGGTCGCCGGTTTGCTGTATGGCCTG
GTTGCCGGGCTGGCACGTTGGGGTTGGTGGCCTGCACGGCTGCCCTGGTTGCCCTGGGCGTGTGGCTTGGCCATGACCGC
AGCACTGGCCTACGCTTGGCTGGCCGGTGGGGGCGTGCCGGTGCAGCGTGCCTGCCTGATGCTGGCCGTGGTGCTGCTCT
GGCGTCTGCGTTTTCGTCACCTCGGTGCATTGTTGCCGCTGTTGTTGGCGCTGGTCGTGGTGTTGCTAGTCGAACCGCTG
GCGGCATTGTTGCCGGGGTTCTGGCTGTCGTTTACCGCAGTCGCCACGCTTCTCTATTGCTTCAGTGCCCGGCTAGGGGG
CTGGCGGCCCTGGCAAGCCTGGACGCGGGCGCAATGGGTAATCGCTATCGGTTTGCTGCCAGTGTTGTTGGCCACTGGCC
TGCCGGTGAGCTTGAGTGCGCCGTTGGCCAATCTGGTAGCGGTGCCGTGGATCAGCCTGGTGGTGTTGCCGTTGGCGCTG
CTGGGCACGGTGCTGCTGCCATTGCCCGTGGTAGGGGAGGCGTTGTTATGGCTGGCGGGCGGGCTGCTGGACCTGTTGTT
CCGAGGGTTGGCGTTGGTGGCGCAACAGCGCCCGGCGTGGATGCCGGCGGTATTGCCAGTGTGGGCCTGGTTACTGGTTT
GCGTGGGGGCGCTGTTGGTGCTGCTGCCTCGGGGCGTGCCGTTGCGTGGGTTGGGGGGCGTGATGCTGTTGGCCCTGTGG
GTGCCGAGGGAGCCGGTGCCGCTTGGGCAGGTCGAAGTCTGGCAACTGGACGTCGGTCAAGGGCTGGCAGTGCTGTTGCG
CACGCGCCACCACAACCTGCTTTACGATGCCGGTCCGGCCAAGGGTGACAGTGACCTGGGCGAGCGGGTGGTGCTGCCGA
CCCTGCGCAAGCTGGGGGTGGCGGGCCTTGACGTGATGCTGGTCAGCCACGCCCATGCTGATCATGCGGGCGGCGCTGCC
GCCATCCAGCGAGGTCTGCCGGTGCGGCGGACAATCGGTGGGGAAGCGCTGAACGATGTTCCGTTGCAACCTTGTGTCAG
CGGCGAGCGATGGGACTGGGATGGCGTGCGATTTTCGCTATGGCGTTGGGCCGACGGACAGAGCAGCAATGACCGCTCGT
GCGTGCTGATGGTCGAGGCGCAGGGCGAGCGCTTGCTGCTGGCAGGGGATATGGAGGCCGGTGCCGAACGGGCCTGGCTG
GCGGCAGCCGAGACGCCGAGGGTCGACTGGTTGCAGTCGCCACACCATGGCAGCCGCAGCTCGTCCAGCGAGGCCTTCAT
CCGTGCCACGGCGCCGCGCGGGGTGCTGATTTCGCGGGGGCGCAACAATAGCTTCGGGCACCCGCATGTACAGGTGGTCG
AGCGCTATCGGCGGTATGGGGTGACGATACATGATACGGCGGTGGAGGGGGCGTTGCGGTTGGTGCTGGGGCGGCAGGGG
GAGGTTGAAGGTGTTCGGGGGCAGCGGCGGTTTTGGCGGGCTCAACTGGACTAG

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-674)

• Competence protein (Competence) (198-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.028	97.693	0.577
comA	Ralstonia pseudosolanacearum GMI1000	36.154	100	0.383