Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LU688_RS25180 Genome accession   NZ_CP128543
Coordinates   5462132..5462533 (-) Length   133 a.a.
NCBI ID   WP_023631716.1    Uniprot ID   A0A1H9SY95
Organism   Pseudomonas soli strain NMI4264_15     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5457132..5467533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LU688_RS25165 (LU688_25165) - 5459080..5461104 (-) 2025 WP_094012386.1 methyl-accepting chemotaxis protein -
  LU688_RS25170 (LU688_25170) - 5461168..5461722 (-) 555 WP_038706921.1 chemotaxis protein CheW -
  LU688_RS25175 (LU688_25175) pilH 5461719..5462084 (-) 366 WP_023631715.1 twitching motility response regulator PilH -
  LU688_RS25180 (LU688_25180) pilG 5462132..5462533 (-) 402 WP_023631716.1 twitching motility response regulator PilG Regulator
  LU688_RS25185 (LU688_25185) gshB 5462717..5463670 (+) 954 WP_046853923.1 glutathione synthase -
  LU688_RS25190 (LU688_25190) - 5463904..5464803 (+) 900 WP_160290835.1 energy transducer TonB -
  LU688_RS25195 (LU688_25195) - 5464897..5465466 (+) 570 WP_038706923.1 YqgE/AlgH family protein -
  LU688_RS25200 (LU688_25200) ruvX 5465466..5465891 (+) 426 WP_023633141.1 Holliday junction resolvase RuvX -
  LU688_RS25205 (LU688_25205) pyrR 5465944..5466462 (+) 519 WP_038706924.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  LU688_RS25210 (LU688_25210) - 5466475..5467479 (+) 1005 WP_038706925.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14752.11 Da        Isoelectric Point: 6.7058

>NTDB_id=848644 LU688_RS25180 WP_023631716.1 5462132..5462533(-) (pilG) [Pseudomonas soli strain NMI4264_15]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHKPRVIFVDVLMPRLDGYQTCAIIKHNREFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRACVPGFAAQDPHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=848644 LU688_RS25180 WP_023631716.1 5462132..5462533(-) (pilG) [Pseudomonas soli strain NMI4264_15]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAGGC
AGGCTGCGAGGTGATCACCGCCAGTGACGGCTTCGACGCCCTGGCCAAGATCGTCGACCACAAACCGCGGGTCATCTTCG
TCGACGTGCTGATGCCGCGCCTCGACGGCTACCAGACCTGCGCCATCATCAAGCACAACCGCGAGTTCAAGGACACCCCG
GTGATCCTGCTCTCTTCCCGCGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGTTCCGACCAGTTCCTGACCAA
ACCTTTCAGCAAGGAAGAACTGCTCGACGCGATCCGTGCCTGCGTGCCGGGCTTCGCCGCGCAGGATCCACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H9SY95

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.213

91.729

0.617