Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | QUE04_RS09330 | Genome accession | NZ_AP027206 |
| Coordinates | 1946511..1947026 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130210.1 | Uniprot ID | B6I678 |
| Organism | Escherichia coli strain JNE082640 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1941511..1952026
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE04_RS09285 (JNE082640_17640) | csrA | 1942231..1942416 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| QUE04_RS09315 (JNE082640_17650) | yqaB | 1943741..1944307 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| QUE04_RS09320 (JNE082640_17660) | yqaA | 1944304..1944732 (+) | 429 | WP_001287457.1 | YqaA family protein | - |
| QUE04_RS09325 (JNE082640_17670) | gshA | 1944805..1946361 (+) | 1557 | WP_000611770.1 | glutamate--cysteine ligase | - |
| QUE04_RS09330 (JNE082640_17680) | luxS | 1946511..1947026 (+) | 516 | WP_001130210.1 | S-ribosylhomocysteine lyase | Regulator |
| QUE04_RS09335 (JNE082640_17690) | emrB | 1947090..1948628 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| QUE04_RS09340 (JNE082640_17700) | emrA | 1948645..1949817 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| QUE04_RS09345 (JNE082640_17710) | emrR | 1949944..1950474 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| QUE04_RS09350 (JNE082640_17720) | ygaH | 1950565..1950900 (-) | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| QUE04_RS09355 (JNE082640_17730) | ygaZ | 1950890..1951627 (-) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19417.13 Da Isoelectric Point: 4.7556
>NTDB_id=84857 QUE04_RS09330 WP_001130210.1 1946511..1947026(+) (luxS) [Escherichia coli strain JNE082640]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=84857 QUE04_RS09330 WP_001130210.1 1946511..1947026(+) (luxS) [Escherichia coli strain JNE082640]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |