Detailed information NTG0848379

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V5100_RS00985
• Genome accession: NZ_CP144930
• Coordinates: 194587..195570 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain SCPM-O-B-9504
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 189587..200570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5100_RS00965 (V5100_00955)	dppA	190730..192337 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
V5100_RS00970 (V5100_00960)	-	192371..192481 (-)	111	Protein_190	hypothetical protein	-
V5100_RS00975 (V5100_00965)	dppB	192645..193664 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V5100_RS00980 (V5100_00970)	dppC	193674..194576 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V5100_RS00985 (V5100_00975)	amiE	194587..195570 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V5100_RS00990 (V5100_00980)	dppF	195567..196571 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V5100_RS00995 (V5100_00985)	yhjV	196601..197872 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
V5100_RS01000 (V5100_00990)	ldrD	198348..198455 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
V5100_RS01005 (V5100_00995)	bcsG	198542..200221 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
V5100_RS01010 (V5100_01000)	bcsF	200218..200409 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=848379 V5100_RS00985 WP_001196486.1 194587..195570(+) (amiE) [Escherichia coli strain SCPM-O-B-9504]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=848379 V5100_RS00985 WP_001196486.1 194587..195570(+) (amiE) [Escherichia coli strain SCPM-O-B-9504]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404