Detailed information    

insolico Bioinformatically predicted

Overview

Name   hexB   Type   Machinery gene
Locus tag   V5G23_RS20925 Genome accession   NZ_CP144925
Coordinates   3981854..3983764 (-) Length   636 a.a.
NCBI ID   WP_003181972.1    Uniprot ID   Q65JE1
Organism   Bacillus licheniformis strain CP13     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3976854..3988764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G23_RS20890 (V5G23_20890) - 3977026..3977520 (+) 495 WP_011197989.1 arsinothricin resistance N-acetyltransferase ArsN1 family A -
  V5G23_RS20895 (V5G23_20895) - 3977899..3978285 (+) 387 WP_003181982.1 (2Fe-2S) ferredoxin domain-containing protein -
  V5G23_RS20900 (V5G23_20900) - 3978296..3979288 (+) 993 WP_003181980.1 GTP-binding protein -
  V5G23_RS20905 (V5G23_20905) - 3979792..3980229 (-) 438 WP_011201654.1 hypothetical protein -
  V5G23_RS20910 (V5G23_20910) - 3980285..3980533 (-) 249 WP_080508521.1 HNH/endonuclease VII fold putative polymorphic toxin -
  V5G23_RS20915 (V5G23_20915) - 3980530..3981057 (-) 528 WP_003181977.1 pre-toxin TG domain-containing protein -
  V5G23_RS20920 (V5G23_20920) - 3981239..3981520 (-) 282 WP_003181975.1 putative quinol monooxygenase -
  V5G23_RS20925 (V5G23_20925) hexB 3981854..3983764 (-) 1911 WP_003181972.1 DNA mismatch repair endonuclease MutL Machinery gene
  V5G23_RS20930 (V5G23_20930) hexA 3983782..3986391 (-) 2610 WP_011197985.1 DNA mismatch repair protein MutS Machinery gene
  V5G23_RS20935 (V5G23_20935) cotE 3986502..3987050 (-) 549 WP_003181968.1 outer spore coat protein CotE -
  V5G23_RS20940 (V5G23_20940) ymcA 3987293..3987724 (-) 432 WP_003181967.1 RicAFT regulatory complex protein RicA family protein Regulator

Sequence

Protein


Download         Length: 636 a.a.        Molecular weight: 71389.32 Da        Isoelectric Point: 5.2899

>NTDB_id=848193 V5G23_RS20925 WP_003181972.1 3981854..3983764(-) (hexB) [Bacillus licheniformis strain CP13]
MAKIVQLPDDLSNKIAAGEVVERPASVVKELVENAIDANSSVIEIDVEEAGLASIKVLDDGEGMDAEDCRTAFLRHATSK
IKDENDLFRVRTLGFRGEALPSIASVSHLSIKTSTGEGAGTHLTLQGGRIISEQKAPSRRGTEITVTNLFFNTPARLKYM
KTIHTELGNITDVVNRIALAHPEVSIRLRHQGKTLLQTNGNGDVRHVLAAIYGTAVAKKMLPLEARSLDFEVKGYIALPE
ITRASRNYMSSVVNGRYIKNFPLVKAIHEGYHTLLPIGRHPITFIEINMDPLLVDVNVHPSKLEVRLSKETELHELIRDA
IKDVFKQQQLIPSVQVPKKTAPLINKPEQQKLDFDQVREPAPLSDSDVEREYKPEPSFSAMKLSSLVKDPPPSAPVEREE
NVMQDTEPEWPGAEEYTPEAAPAVQAEPEQAGENVQDEETPKERVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIK
YEYFREKVGEVESEVQDLLVPLTFHYSKNEALTIDQHLDDLAKVGVFLESFGAGSYIVRCHPTWFPKGEETTIIEDIIQQ
VLDDRTIDIKKLREEAAIMMSCKGSIKANHHLRDDEITALLDELRRTSDPFTCPHGRPIIIHYSTYEMEKMFKRVM

Nucleotide


Download         Length: 1911 bp        

>NTDB_id=848193 V5G23_RS20925 WP_003181972.1 3981854..3983764(-) (hexB) [Bacillus licheniformis strain CP13]
TTGGCAAAAATTGTTCAGCTGCCTGACGATTTATCGAATAAAATCGCGGCGGGTGAAGTAGTGGAAAGGCCGGCGTCGGT
CGTCAAAGAGCTTGTCGAAAATGCAATCGATGCGAACAGCTCCGTGATTGAAATCGATGTTGAAGAAGCGGGTCTCGCCT
CGATTAAAGTGCTTGACGACGGCGAAGGGATGGACGCAGAAGACTGCAGAACGGCTTTTTTGCGTCATGCCACAAGCAAA
ATCAAAGACGAAAACGACCTGTTTCGCGTCAGAACGCTCGGATTTCGCGGAGAAGCTTTGCCAAGTATCGCGTCTGTCTC
ACACTTAAGCATTAAAACGAGCACCGGAGAAGGGGCAGGCACCCATTTGACGCTGCAGGGGGGAAGAATCATTTCCGAGC
AAAAAGCGCCAAGCCGCAGAGGAACCGAAATTACGGTTACCAACCTGTTTTTCAATACGCCGGCAAGGCTGAAATACATG
AAAACGATTCATACCGAGCTTGGCAACATCACAGATGTGGTCAACAGAATCGCCCTTGCTCATCCGGAAGTTTCGATCAG
GCTGCGTCATCAAGGGAAAACGCTTCTGCAGACAAACGGAAACGGCGATGTCCGCCACGTGCTTGCGGCGATTTACGGCA
CGGCGGTTGCCAAAAAAATGCTCCCGCTTGAAGCGAGATCTCTTGACTTTGAAGTGAAGGGCTATATCGCTCTTCCTGAA
ATTACGCGCGCCTCGCGAAATTACATGTCATCTGTCGTCAACGGCAGATACATTAAAAACTTCCCGCTCGTAAAAGCGAT
CCACGAGGGCTACCATACGCTTCTTCCGATCGGCCGCCATCCGATCACGTTCATTGAAATCAACATGGACCCGCTCCTTG
TGGACGTCAACGTGCACCCGTCAAAGCTGGAGGTCAGGCTGAGCAAAGAGACGGAGCTTCACGAGCTGATTCGCGACGCC
ATCAAAGACGTCTTTAAACAGCAGCAGCTCATTCCAAGCGTGCAGGTCCCGAAAAAAACCGCACCTCTGATCAATAAACC
AGAGCAGCAAAAGCTTGATTTCGACCAGGTACGAGAACCGGCACCTCTTTCTGATTCTGATGTTGAAAGAGAGTATAAGC
CGGAGCCTTCGTTTTCGGCGATGAAATTAAGCTCGCTTGTCAAAGACCCGCCGCCTTCCGCTCCCGTAGAGCGCGAAGAA
AACGTAATGCAGGACACCGAGCCTGAATGGCCCGGAGCTGAAGAGTATACGCCTGAAGCCGCGCCGGCCGTACAAGCAGA
ACCGGAACAGGCAGGAGAGAACGTCCAGGACGAAGAGACGCCAAAAGAAAGGGTGCCGATCATGTATCCGATCGGCCAAA
TGCACGGCACCTACATACTTGCCCAAAATGAAAACGGGCTGTACATCATCGATCAGCACGCCGCACAGGAGCGGATCAAA
TACGAATATTTCCGTGAAAAAGTCGGGGAAGTCGAATCGGAAGTCCAGGACCTGCTTGTGCCGCTGACATTCCATTATTC
AAAAAATGAAGCGCTGACGATCGACCAGCACTTGGACGATTTAGCCAAAGTCGGCGTCTTTCTCGAATCGTTCGGCGCCG
GCAGCTATATCGTCCGATGCCACCCGACATGGTTTCCGAAAGGGGAAGAAACGACGATCATTGAAGACATCATTCAGCAG
GTCCTTGATGACCGCACGATCGACATCAAAAAACTGCGCGAAGAAGCCGCAATCATGATGAGCTGCAAAGGCTCCATCAA
AGCCAATCATCACCTGCGGGACGACGAAATCACCGCCCTGCTCGATGAGCTGCGCAGAACATCCGACCCTTTCACATGCC
CGCACGGCCGGCCGATCATCATCCACTACTCCACCTATGAGATGGAGAAGATGTTTAAGCGGGTAATGTAA

Domains

Predicted by InterProScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3)

(25-136)

MutL C terminal dimerisation domain (MutL_C)

(451-592)

DNA mismatch repair protein, C-terminal domain (DNA_mis_repair)

(209-324)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65JE1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexB Streptococcus pneumoniae R6

45.859

100

0.47