Detailed information NTG0848090

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: V5G23_RS02090
• Genome accession: NZ_CP144925
• Coordinates: 399829..400947 (-)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain CP13
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 394829..405947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5G23_RS02060 (V5G23_02060)	-	395538..396764 (-)	1227	WP_009328954.1	DNA repair exonuclease	-
V5G23_RS02065 (V5G23_02065)	-	396884..398152 (-)	1269	WP_003180232.1	ABC transporter permease	-
V5G23_RS02070 (V5G23_02070)	-	398145..399041 (-)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
V5G23_RS02075 (V5G23_02075)	-	399159..399344 (+)	186	WP_003180228.1	YhzD family protein	-
V5G23_RS02080 (V5G23_02080)	-	399419..399697 (-)	279	WP_003180226.1	hypothetical protein	-
V5G23_RS02085 (V5G23_02085)	-	399702..399839 (-)	138	WP_016886158.1	hypothetical protein	-
V5G23_RS02090 (V5G23_02090)	rapC	399829..400947 (-)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
V5G23_RS02095 (V5G23_02095)	-	401074..401850 (-)	777	WP_011197707.1	enoyl-CoA hydratase	-
V5G23_RS02100 (V5G23_02100)	-	402051..402380 (+)	330	WP_016886161.1	hypothetical protein	-
V5G23_RS02105 (V5G23_02105)	-	402445..402942 (+)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
V5G23_RS02110 (V5G23_02110)	-	402949..404160 (+)	1212	WP_003180218.1	cation:proton antiporter	-
V5G23_RS02115 (V5G23_02115)	-	404242..405747 (-)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=848090 V5G23_RS02090 WP_009328956.1 399829..400947(-) (rapC) [Bacillus licheniformis strain CP13]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=848090 V5G23_RS02090 WP_009328956.1 399829..400947(-) (rapC) [Bacillus licheniformis strain CP13]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374