Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   V5G22_RS19195 Genome accession   NZ_CP144920
Coordinates   3738813..3739436 (+) Length   207 a.a.
NCBI ID   WP_003182222.1    Uniprot ID   Q65J42
Organism   Bacillus licheniformis strain CP26     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3733813..3744436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G22_RS19160 (V5G22_19160) - 3734077..3734238 (+) 162 WP_202604361.1 aspartyl-phosphate phosphatase Spo0E family protein -
  V5G22_RS19165 (V5G22_19165) - 3734319..3734537 (-) 219 WP_003182236.1 YneF family protein -
  V5G22_RS19170 (V5G22_19170) sirA 3734622..3735059 (-) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  V5G22_RS19175 (V5G22_19175) recP/tkt 3735214..3737217 (-) 2004 WP_009328229.1 transketolase Machinery gene
  V5G22_RS19180 (V5G22_19180) - 3737384..3737617 (-) 234 WP_003182231.1 DUF896 domain-containing protein -
  V5G22_RS19185 (V5G22_19185) - 3737683..3738330 (-) 648 WP_003182227.1 recombinase family protein -
  V5G22_RS19190 (V5G22_19190) yneA 3738349..3738660 (-) 312 WP_003182225.1 cell division suppressor protein YneA -
  V5G22_RS19195 (V5G22_19195) dinR/lexA 3738813..3739436 (+) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  V5G22_RS19200 (V5G22_19200) nucA/comI 3739632..3740060 (-) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  V5G22_RS19205 (V5G22_19205) - 3740419..3741258 (-) 840 WP_003182218.1 thymidylate synthase -
  V5G22_RS19210 (V5G22_19210) - 3741318..3742079 (-) 762 WP_003182215.1 hypothetical protein -
  V5G22_RS19215 (V5G22_19215) - 3742170..3743003 (-) 834 WP_003182213.1 prohibitin family protein -
  V5G22_RS19220 (V5G22_19220) - 3742996..3743136 (-) 141 WP_003182211.1 hypothetical protein -
  V5G22_RS19225 (V5G22_19225) wrbA 3743457..3744068 (-) 612 WP_011198006.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23263.85 Da        Isoelectric Point: 5.3807

>NTDB_id=848044 V5G22_RS19195 WP_003182222.1 3738813..3739436(+) (dinR/lexA) [Bacillus licheniformis strain CP26]
MTKLSKRQLDILRFIKEEVKRKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDTEEEIHIPKN
QVVNVPVIGKVTAGTPITAVENIEEYFPLPERLAPPDEHVFMLEIMGESMIDAGILDQDYVIVKQQNTANNGDIVVAMTE
DDEATVKRFFKEETHIRLQPENPTMEPIILQNVTILGKVIGVFRTVH

Nucleotide


Download         Length: 624 bp        

>NTDB_id=848044 V5G22_RS19195 WP_003182222.1 3738813..3739436(+) (dinR/lexA) [Bacillus licheniformis strain CP26]
ATGACGAAGCTATCAAAAAGACAACTTGATATTTTGCGTTTCATTAAAGAAGAAGTGAAGCGCAAAGGCTATCCGCCTTC
CGTCAGGGAGATCGGAGAAGCGGTCGGCCTGGCGTCAAGTTCAACGGTACACGGCCACTTGGCAAGGCTTGAAACGAAGG
GATTGATCAGAAGGGATCCGACGAAGCCGAGAGCGATCGAAATTCTCGATACAGAGGAGGAAATTCATATTCCGAAAAAC
CAGGTTGTCAATGTCCCGGTCATCGGAAAGGTGACCGCCGGTACACCGATTACCGCAGTCGAAAACATCGAGGAATACTT
TCCGCTTCCCGAACGCCTGGCGCCGCCGGATGAGCACGTCTTCATGCTGGAGATCATGGGAGAAAGCATGATCGATGCCG
GAATTCTTGATCAAGATTATGTGATTGTCAAGCAGCAGAACACCGCAAACAACGGGGATATCGTCGTTGCGATGACCGAA
GACGACGAAGCGACTGTTAAGCGGTTTTTCAAGGAGGAAACCCATATCCGCCTTCAGCCGGAAAACCCGACGATGGAGCC
GATCATCCTTCAGAATGTGACGATTCTCGGAAAAGTCATCGGCGTTTTTCGCACTGTTCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-200)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65J42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913