Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QTN49_RS14200 Genome accession   NZ_CP128504
Coordinates   2883831..2884022 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain SRCM123434     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2878831..2889022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN49_RS14175 (QTN49_14175) - 2879190..2880176 (-) 987 WP_017417448.1 ABC transporter ATP-binding protein -
  QTN49_RS14180 (QTN49_14180) - 2880350..2881135 (-) 786 WP_017417447.1 DUF2268 domain-containing protein -
  QTN49_RS14185 (QTN49_14185) fabF 2881219..2882457 (-) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  QTN49_RS14190 (QTN49_14190) - 2882479..2883417 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  QTN49_RS14195 (QTN49_14195) - 2883584..2883802 (+) 219 WP_007409123.1 hypothetical protein -
  QTN49_RS14200 (QTN49_14200) comZ 2883831..2884022 (-) 192 WP_003155061.1 ComZ family protein Regulator
  QTN49_RS14205 (QTN49_14205) med 2884035..2884988 (-) 954 WP_072177123.1 BMP family ABC transporter substrate-binding protein Regulator
  QTN49_RS14210 (QTN49_14210) - 2885079..2885645 (-) 567 WP_017417444.1 hypothetical protein -
  QTN49_RS14215 (QTN49_14215) - 2885728..2886461 (-) 734 Protein_2807 hypothetical protein -
  QTN49_RS14220 (QTN49_14220) - 2886722..2886907 (+) 186 WP_007409129.1 YjzD family protein -
  QTN49_RS14225 (QTN49_14225) - 2886944..2887123 (-) 180 WP_003155070.1 YjzC family protein -
  QTN49_RS14230 (QTN49_14230) argF 2887199..2888170 (-) 972 WP_289413858.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=848018 QTN49_RS14200 WP_003155061.1 2883831..2884022(-) (comZ) [Bacillus velezensis strain SRCM123434]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=848018 QTN49_RS14200 WP_003155061.1 2883831..2884022(-) (comZ) [Bacillus velezensis strain SRCM123434]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCATATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794