Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QTN49_RS12595 Genome accession   NZ_CP128504
Coordinates   2583405..2584001 (-) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123434     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2578405..2589001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN49_RS12570 (QTN49_12570) mobB 2578781..2579302 (-) 522 WP_163093945.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QTN49_RS12575 (QTN49_12575) glp 2579263..2580555 (-) 1293 WP_014417621.1 gephyrin-like molybdotransferase Glp -
  QTN49_RS12580 (QTN49_12580) - 2580573..2581592 (-) 1020 WP_065180237.1 molybdopterin-synthase adenylyltransferase MoeB -
  QTN49_RS12585 (QTN49_12585) - 2581644..2582246 (-) 603 WP_106067851.1 molybdenum cofactor guanylyltransferase -
  QTN49_RS12590 (QTN49_12590) - 2582392..2583384 (+) 993 WP_106067852.1 sporulation protein -
  QTN49_RS12595 (QTN49_12595) rok 2583405..2584001 (-) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  QTN49_RS12600 (QTN49_12600) - 2584453..2584911 (-) 459 WP_017417682.1 TlpA disulfide reductase family protein -
  QTN49_RS12605 (QTN49_12605) - 2585199..2586005 (+) 807 WP_025649509.1 mechanosensitive ion channel family protein -
  QTN49_RS12610 (QTN49_12610) - 2586039..2586284 (-) 246 WP_003154596.1 YkuS family protein -
  QTN49_RS12615 (QTN49_12615) - 2586345..2587469 (-) 1125 WP_017417680.1 N-acetyldiaminopimelate deacetylase -
  QTN49_RS12620 (QTN49_12620) dapD 2587540..2588250 (-) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QTN49_RS12625 (QTN49_12625) - 2588332..2588787 (-) 456 WP_014417614.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=848010 QTN49_RS12595 WP_003154591.1 2583405..2584001(-) (rok) [Bacillus velezensis strain SRCM123434]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=848010 QTN49_RS12595 WP_003154591.1 2583405..2584001(-) (rok) [Bacillus velezensis strain SRCM123434]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTAAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCGGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATATCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843