Detailed information NTG0848009

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: V5G22_RS14530
• Genome accession: NZ_CP144920
• Coordinates: 2858969..2860234 (+)
• Length: 421 a.a.
• NCBI ID: WP_003184083.1
• Uniprot ID: A0A6I7TM22
• Organism: Bacillus licheniformis strain CP26
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2853969..2865234

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5G22_RS14510 (V5G22_14510)	leuC	2854032..2855450 (+)	1419	WP_003184089.1	3-isopropylmalate dehydratase large subunit	-
V5G22_RS14515 (V5G22_14515)	leuD	2855463..2856062 (+)	600	WP_003184088.1	3-isopropylmalate dehydratase small subunit	-
V5G22_RS14520 (V5G22_14520)	ddcA	2856192..2857199 (+)	1008	WP_003184086.1	DNA damage checkpoint antagonist DdcA	-
V5G22_RS14525 (V5G22_14525)	tig	2857426..2858700 (+)	1275	WP_003184085.1	trigger factor	-
V5G22_RS14530 (V5G22_14530)	clpX	2858969..2860234 (+)	1266	WP_003184083.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
V5G22_RS14535 (V5G22_14535)	lonB	2860417..2862072 (+)	1656	WP_003184080.1	ATP-dependent protease LonB	-
V5G22_RS14540 (V5G22_14540)	lon	2862291..2864615 (+)	2325	WP_016885551.1	endopeptidase La	-
V5G22_RS14545 (V5G22_14545)	yihA	2864612..2865199 (+)	588	WP_003184076.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46684.76 Da
• Isoelectric Point: 4.7004

>NTDB_id=848009 V5G22_RS14530 WP_003184083.1 2858969..2860234(+) (clpX) [Bacillus licheniformis strain CP26]
MFKFNEEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCTEIVEEELGSEEEVEFKDVPKPKEIREILDEYVIGQDQ
AKKSLAVAVYNHYKRINSNSKVDDVELSKSNISMIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILL
KLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNI
LFICGGAFDGIEQIIKRRLGQKVIGFGSDNKHEDLEKEALLSKVLPEDLLRFGLIPEFIGRLPIIASLEPLDEKALVEIL
TKPKNALVKQYRKMLELDDVELVFEDEALTEIAKKAIERKTGARGLRSIIEGIMLDVMFDLPSREDIEKCVITGKTVTDG
EPPRLIMKDGTVVNKDKKTSA

Nucleotide

• Length: 1266 bp

>NTDB_id=848009 V5G22_RS14530 WP_003184083.1 2858969..2860234(+) (clpX) [Bacillus licheniformis strain CP26]
ATGTTTAAATTCAACGAGGAAAAAGGACAATTGAAATGCTCGTTTTGCGGTAAAACACAAGATCAGGTACGCAAGCTTGT
CGCCGGACCAGGCGTATATATATGTGACGAGTGCATCGAACTTTGCACTGAAATTGTAGAAGAGGAACTCGGCTCTGAAG
AAGAAGTGGAGTTCAAAGATGTTCCGAAGCCAAAGGAAATCCGCGAGATTCTTGATGAATACGTCATCGGCCAGGACCAG
GCAAAAAAATCCCTTGCCGTGGCCGTCTACAATCATTACAAGCGGATCAATTCGAACAGCAAAGTCGACGACGTCGAGCT
GTCAAAAAGTAACATTTCCATGATCGGACCGACTGGAAGCGGAAAAACGCTTCTTGCTCAAACGCTTGCCCGCATCCTGA
ATGTGCCGTTCGCCATTGCGGATGCCACGTCGCTTACTGAAGCAGGCTATGTCGGTGAAGATGTGGAGAACATTTTGCTT
AAGCTGATCCAGGCAGCTGACTACGATGTTGAAAAAGCGGAAAAAGGCATTATCTACATCGATGAAATCGATAAAGTGGC
CAGAAAGTCCGAGAACCCTTCGATTACACGCGATGTATCAGGCGAAGGCGTTCAGCAGGCATTGCTTAAAATTCTTGAAG
GTACGGTTGCCAGCGTTCCTCCACAAGGCGGAAGAAAGCATCCTCATCAAGAGTTCATCCAAATTGACACAACCAACATC
CTGTTCATTTGCGGCGGAGCTTTTGACGGAATCGAGCAGATCATCAAGCGCCGTCTCGGCCAGAAGGTCATCGGCTTCGG
CTCTGACAACAAGCATGAAGACCTTGAAAAAGAAGCGCTTCTTTCCAAAGTGCTTCCGGAAGACTTGCTTCGCTTCGGGC
TGATCCCTGAATTCATCGGCCGTCTCCCGATCATCGCAAGCCTTGAGCCGCTGGATGAAAAAGCGCTGGTTGAAATTTTA
ACAAAACCGAAAAACGCGCTTGTTAAACAATATAGAAAAATGCTTGAATTGGATGATGTGGAGCTTGTGTTTGAAGACGA
AGCGCTCACAGAAATCGCTAAAAAAGCAATTGAACGTAAAACAGGAGCACGCGGACTTCGTTCCATTATCGAAGGAATCA
TGCTCGACGTGATGTTTGATCTGCCGTCTCGCGAGGATATTGAAAAATGCGTGATCACAGGCAAAACCGTCACTGACGGC
GAACCGCCGCGTCTCATTATGAAAGACGGCACGGTCGTCAATAAAGACAAAAAAACTTCAGCATAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (109-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-389)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A6I7TM22

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	68.766	94.299	0.648
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.413	97.15	0.577