Detailed information NTG0847972

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QTN49_RS02875
• Genome accession: NZ_CP128504
• Coordinates: 565984..567147 (+)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain SRCM123434
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 560984..572147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTN49_RS02855 (QTN49_02855)	-	561413..562609 (+)	1197	WP_071182023.1	glycosyltransferase	-
QTN49_RS02860 (QTN49_02860)	-	562741..563817 (+)	1077	WP_003151382.1	MraY family glycosyltransferase	-
QTN49_RS02865 (QTN49_02865)	-	563916..565109 (-)	1194	WP_151140083.1	LCP family protein	-
QTN49_RS02870 (QTN49_02870)	-	565114..565761 (-)	648	WP_060657503.1	YigZ family protein	-
QTN49_RS02875 (QTN49_02875)	degS	565984..567147 (+)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
QTN49_RS02880 (QTN49_02880)	degU	567224..567913 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QTN49_RS02885 (QTN49_02885)	-	568011..568859 (+)	849	WP_003151387.1	DegV family protein	-
QTN49_RS02890 (QTN49_02890)	comFA	568967..570352 (+)	1386	WP_104842867.1	DEAD/DEAH box helicase	Machinery gene
QTN49_RS02895 (QTN49_02895)	-	570410..570694 (+)	285	WP_003151389.1	competence protein ComFB	-
QTN49_RS02900 (QTN49_02900)	comFC	570700..571389 (+)	690	WP_201741798.1	phosphoribosyltransferase family protein	Machinery gene
QTN49_RS02905 (QTN49_02905)	-	571463..571882 (+)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=847972 QTN49_RS02875 WP_007407484.1 565984..567147(+) (degS) [Bacillus velezensis strain SRCM123434]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=847972 QTN49_RS02875 WP_007407484.1 565984..567147(+) (degS) [Bacillus velezensis strain SRCM123434]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGTGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951