Detailed information NTG0847968

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QTN49_RS01930
• Genome accession: NZ_CP128504
• Coordinates: 374040..375185 (-)
• Length: 381 a.a.
• NCBI ID: WP_289414308.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM123434
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 369040..380185

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTN49_RS01905 (QTN49_01905)	-	369324..369755 (+)	432	WP_017418704.1	hypothetical protein	-
QTN49_RS01910 (QTN49_01910)	-	369780..371852 (-)	2073	WP_106067806.1	transglycosylase domain-containing protein	-
QTN49_RS01915 (QTN49_01915)	speE	372052..372882 (+)	831	WP_003151052.1	spermidine synthase	-
QTN49_RS01920 (QTN49_01920)	speB	372942..373814 (+)	873	WP_003151054.1	agmatinase	-
QTN49_RS01925 (QTN49_01925)	-	373937..374056 (-)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
QTN49_RS01930 (QTN49_01930)	rapF	374040..375185 (-)	1146	WP_289414308.1	Rap family tetratricopeptide repeat protein	Regulator
QTN49_RS01935 (QTN49_01935)	-	375477..375905 (+)	429	WP_003151069.1	DUF1934 family protein	-
QTN49_RS01940 (QTN49_01940)	argS	375902..377572 (+)	1671	WP_181816594.1	arginine--tRNA ligase	-
QTN49_RS01945 (QTN49_01945)	narK	377707..378897 (+)	1191	WP_181816593.1	nitrate transporter NarK	-
QTN49_RS01950 (QTN49_01950)	fnr	378995..379711 (+)	717	WP_017418713.1	fumarate/nitrate reduction transcriptional regulator Fnr	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45816.31 Da
• Isoelectric Point: 5.0694

>NTDB_id=847968 QTN49_RS01930 WP_289414308.1 374040..375185(-) (rapF) [Bacillus velezensis strain SRCM123434]
MASVLSSSAIGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYFIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=847968 QTN49_RS01930 WP_289414308.1 374040..375185(-) (rapF) [Bacillus velezensis strain SRCM123434]
GTGGCGAGTGTTTTATCGTCTTCAGCGATTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGATTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGCCTGGAAGATGACCAGGATCTTCACCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTCATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.158	99.738	0.53