Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QTN48_RS16160 Genome accession   NZ_CP128503
Coordinates   3140492..3140683 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain SRCM123422     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3135492..3145683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN48_RS16135 (QTN48_16135) - 3135849..3136835 (-) 987 WP_017417448.1 ABC transporter ATP-binding protein -
  QTN48_RS16140 (QTN48_16140) - 3137009..3137794 (-) 786 WP_017417447.1 DUF2268 domain-containing protein -
  QTN48_RS16145 (QTN48_16145) fabF 3137878..3139116 (-) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  QTN48_RS16150 (QTN48_16150) - 3139139..3140077 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  QTN48_RS16155 (QTN48_16155) - 3140245..3140463 (+) 219 WP_007409123.1 hypothetical protein -
  QTN48_RS16160 (QTN48_16160) comZ 3140492..3140683 (-) 192 WP_003155061.1 ComZ family protein Regulator
  QTN48_RS16165 (QTN48_16165) med 3140696..3141649 (-) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  QTN48_RS16170 (QTN48_16170) - 3141740..3142306 (-) 567 WP_032863798.1 hypothetical protein -
  QTN48_RS16175 (QTN48_16175) - 3142389..3143123 (-) 735 WP_014417405.1 hypothetical protein -
  QTN48_RS16180 (QTN48_16180) - 3143384..3143569 (+) 186 WP_007409129.1 YjzD family protein -
  QTN48_RS16185 (QTN48_16185) - 3143606..3143785 (-) 180 WP_003155070.1 YjzC family protein -
  QTN48_RS16190 (QTN48_16190) argF 3143860..3144831 (-) 972 WP_289394583.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=847942 QTN48_RS16160 WP_003155061.1 3140492..3140683(-) (comZ) [Bacillus velezensis strain SRCM123422]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=847942 QTN48_RS16160 WP_003155061.1 3140492..3140683(-) (comZ) [Bacillus velezensis strain SRCM123422]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794