Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QTN48_RS14040 Genome accession   NZ_CP128503
Coordinates   2766537..2767133 (-) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123422     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2761537..2772133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN48_RS14015 (QTN48_14015) mobB 2761913..2762434 (-) 522 WP_017417687.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QTN48_RS14020 (QTN48_14020) glp 2762395..2763687 (-) 1293 WP_017417686.1 gephyrin-like molybdotransferase Glp -
  QTN48_RS14025 (QTN48_14025) - 2763705..2764724 (-) 1020 WP_017417685.1 molybdopterin-synthase adenylyltransferase MoeB -
  QTN48_RS14030 (QTN48_14030) - 2764776..2765378 (-) 603 WP_025649507.1 molybdenum cofactor guanylyltransferase -
  QTN48_RS14035 (QTN48_14035) - 2765524..2766516 (+) 993 WP_014417619.1 hypothetical protein -
  QTN48_RS14040 (QTN48_14040) rok 2766537..2767133 (-) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  QTN48_RS14045 (QTN48_14045) - 2767585..2768043 (-) 459 WP_025649508.1 TlpA disulfide reductase family protein -
  QTN48_RS14050 (QTN48_14050) - 2768331..2769137 (+) 807 WP_025649509.1 mechanosensitive ion channel family protein -
  QTN48_RS14055 (QTN48_14055) - 2769171..2769416 (-) 246 WP_003154596.1 YkuS family protein -
  QTN48_RS14060 (QTN48_14060) - 2769477..2770601 (-) 1125 WP_017417680.1 N-acetyldiaminopimelate deacetylase -
  QTN48_RS14065 (QTN48_14065) dapD 2770672..2771382 (-) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QTN48_RS14070 (QTN48_14070) - 2771464..2771919 (-) 456 WP_014417614.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=847934 QTN48_RS14040 WP_003154591.1 2766537..2767133(-) (rok) [Bacillus velezensis strain SRCM123422]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=847934 QTN48_RS14040 WP_003154591.1 2766537..2767133(-) (rok) [Bacillus velezensis strain SRCM123422]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCGGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843