Detailed information NTG0084790

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QMG97_RS24195
• Genome accession: NZ_AP027197
• Coordinates: 4676292..4677317 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 02E060
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4671292..4682317

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG97_RS24185 (F02E060_4649)	rpmE	4673523..4673735 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QMG97_RS24190 (F02E060_4650)	priA	4673938..4676136 (+)	2199	WP_001341957.1	primosomal protein N'	Machinery gene
QMG97_RS24195 (F02E060_4651)	cytR	4676292..4677317 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QMG97_RS24200 (F02E060_4652)	ftsN	4677409..4678368 (+)	960	WP_000068834.1	cell division protein FtsN	-
QMG97_RS24205 (F02E060_4653)	hslV	4678461..4678991 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QMG97_RS24210 (F02E060_4654)	hslU	4679001..4680332 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QMG97_RS24215 (F02E060_4655)	menA	4680399..4681325 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QMG97_RS24220 (F02E060_4656)	rraA	4681418..4681903 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QMG97_RS24225 (F02E060_4657)	zapB	4681988..4682233 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=84790 QMG97_RS24195 WP_000644904.1 4676292..4677317(+) (cytR) [Escherichia coli strain 02E060]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=84790 QMG97_RS24195 WP_000644904.1 4676292..4677317(+) (cytR) [Escherichia coli strain 02E060]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628