Detailed information NTG0847891

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QTN48_RS01950
• Genome accession: NZ_CP128503
• Coordinates: 379608..380753 (-)
• Length: 381 a.a.
• NCBI ID: WP_017418708.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM123422
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 374608..385753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTN48_RS01925 (QTN48_01925)	-	374892..375323 (+)	432	WP_017418704.1	hypothetical protein	-
QTN48_RS01930 (QTN48_01930)	-	375348..377420 (-)	2073	WP_017418705.1	transglycosylase domain-containing protein	-
QTN48_RS01935 (QTN48_01935)	speE	377620..378450 (+)	831	WP_017418706.1	spermidine synthase	-
QTN48_RS01940 (QTN48_01940)	speB	378510..379382 (+)	873	WP_003151054.1	agmatinase	-
QTN48_RS01945 (QTN48_01945)	-	379505..379624 (-)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
QTN48_RS01950 (QTN48_01950)	rapF	379608..380753 (-)	1146	WP_017418708.1	tetratricopeptide repeat protein	Regulator
QTN48_RS01955 (QTN48_01955)	-	381045..381473 (+)	429	WP_003151069.1	DUF1934 family protein	-
QTN48_RS01960 (QTN48_01960)	argS	381470..383140 (+)	1671	WP_017418711.1	arginine--tRNA ligase	-
QTN48_RS01965 (QTN48_01965)	narK	383275..384465 (+)	1191	WP_017418712.1	nitrate transporter NarK	-
QTN48_RS01970 (QTN48_01970)	fnr	384563..385279 (+)	717	WP_017418713.1	fumarate/nitrate reduction transcriptional regulator Fnr	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=847891 QTN48_RS01950 WP_017418708.1 379608..380753(-) (rapF) [Bacillus velezensis strain SRCM123422]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=847891 QTN48_RS01950 WP_017418708.1 379608..380753(-) (rapF) [Bacillus velezensis strain SRCM123422]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533