Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QTN46_RS01000 Genome accession   NZ_CP128501
Coordinates   204341..204505 (+) Length   54 a.a.
NCBI ID   WP_269387144.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain SRCM123386     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 199341..209505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN46_RS00995 (QTN46_00995) srfAB 201286..204276 (+) 2991 Protein_182 surfactin non-ribosomal peptide synthetase SrfAB -
  QTN46_RS01000 (QTN46_01000) comS 204341..204505 (+) 165 WP_269387144.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6236.25 Da        Isoelectric Point: 12.3302

>NTDB_id=847816 QTN46_RS01000 WP_269387144.1 204341..204505(+) (comS) [Bacillus amyloliquefaciens strain SRCM123386]
MRARRSSSLNRSDKRLIRSIILFPQHNAGCISSISLGRPARATTSLLYFCWRDR

Nucleotide


Download         Length: 165 bp        

>NTDB_id=847816 QTN46_RS01000 WP_269387144.1 204341..204505(+) (comS) [Bacillus amyloliquefaciens strain SRCM123386]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAA
CGCAGGATGTATATCCTCAATCAGCTTGGGCAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGATC
GGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

60.87

85.185

0.519