Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QTN45_RS17985 Genome accession   NZ_CP128500
Coordinates   3492198..3492362 (-) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain SRCM123364     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3487198..3497362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN45_RS17985 (QTN45_17985) comS 3492198..3492362 (-) 165 WP_269194677.1 competence protein ComS Regulator
  QTN45_RS17990 (QTN45_17990) srfAB 3492379..3495471 (-) 3093 Protein_3528 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=847804 QTN45_RS17985 WP_269194677.1 3492198..3492362(-) (comS) [Bacillus amyloliquefaciens strain SRCM123364]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=847804 QTN45_RS17985 WP_269194677.1 3492198..3492362(-) (comS) [Bacillus amyloliquefaciens strain SRCM123364]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5