Detailed information NTG0847725

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: V4U93_RS05825
• Genome accession: NZ_CP144755
• Coordinates: 1166430..1167476 (-)
• Length: 348 a.a.
• NCBI ID: WP_061826983.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei subsp. sakei strain DCF0720
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1161430..1172476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V4U93_RS05800 (V4U93_05800)	rpsT	1161491..1161745 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
V4U93_RS05805 (V4U93_05805)	holA	1161814..1162842 (-)	1029	WP_061826985.1	DNA polymerase III subunit delta	-
V4U93_RS05810 (V4U93_05810)	comEC	1162839..1164905 (-)	2067	WP_226474266.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
V4U93_RS05815 (V4U93_05815)	-	1165103..1165591 (-)	489	WP_011374770.1	ComE operon protein 2	-
V4U93_RS05820 (V4U93_05820)	comEA	1165649..1166356 (-)	708	WP_226474265.1	helix-hairpin-helix domain-containing protein	Machinery gene
V4U93_RS05825 (V4U93_05825)	sepM	1166430..1167476 (-)	1047	WP_061826983.1	SepM family pheromone-processing serine protease	Regulator
V4U93_RS05830 (V4U93_05830)	coaD	1167478..1167975 (-)	498	WP_061826982.1	pantetheine-phosphate adenylyltransferase	-
V4U93_RS05835 (V4U93_05835)	rsmD	1167988..1168542 (-)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
V4U93_RS05840 (V4U93_05840)	-	1168547..1168837 (-)	291	WP_011374775.1	YlbG family protein	-
V4U93_RS05845 (V4U93_05845)	-	1168861..1169949 (-)	1089	WP_061826981.1	CAP-associated domain-containing protein	-
V4U93_RS05850 (V4U93_05850)	-	1169960..1171147 (-)	1188	WP_011374777.1	FtsW/RodA/SpoVE family cell cycle protein	-
V4U93_RS05855 (V4U93_05855)	-	1171156..1171452 (-)	297	WP_016265221.1	DUF1507 family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38160.00 Da
• Isoelectric Point: 9.6893

>NTDB_id=847725 V4U93_RS05825 WP_061826983.1 1166430..1167476(-) (sepM) [Latilactobacillus sakei subsp. sakei strain DCF0720]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYNTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLLRTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRKIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=847725 V4U93_RS05825 WP_061826983.1 1166430..1167476(-) (sepM) [Latilactobacillus sakei subsp. sakei strain DCF0720]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACAATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACTAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCGATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTAAAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGCACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACCGTCT
TTTTTGCACCTAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
TCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (132-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (202-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	44.253	100	0.443