Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   LLA22_RS10765 Genome accession   NZ_CP128421
Coordinates   2120973..2122004 (-) Length   343 a.a.
NCBI ID   WP_396418192.1    Uniprot ID   -
Organism   Lactococcus cremoris strain A.2.2     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 2115973..2127004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLA22_RS10735 (LLA22_10795) - 2117176..2117673 (-) 498 WP_011677211.1 nitroreductase family protein -
  LLA22_RS10740 (LLA22_10800) - 2117660..2117869 (-) 210 WP_011677212.1 hypothetical protein -
  LLA22_RS10745 (LLA22_10805) - 2117866..2118090 (-) 225 WP_021211256.1 hypothetical protein -
  LLA22_RS10750 (LLA22_10810) - 2118157..2119047 (+) 891 WP_015082946.1 IS982 family transposase -
  LLA22_RS10755 (LLA22_10815) kwcM 2119154..2120473 (-) 1320 WP_015082947.1 KxxxW cyclic peptide radical SAM maturase -
  LLA22_RS10760 (LLA22_10820) - 2120541..2120654 (-) 114 WP_011836076.1 KxxxW-cyclized peptide pheromone -
  LLA22_RS10765 (LLA22_10825) sepM 2120973..2122004 (-) 1032 WP_396418192.1 SepM family pheromone-processing serine protease Regulator
  LLA22_RS10770 (LLA22_10830) coaD 2121988..2122488 (-) 501 WP_011677214.1 pantetheine-phosphate adenylyltransferase -
  LLA22_RS10775 (LLA22_10835) rsmD 2122536..2123075 (-) 540 WP_031286167.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  LLA22_RS10780 (LLA22_10840) - 2123245..2124465 (-) 1221 WP_011677216.1 MFS transporter -
  LLA22_RS10785 (LLA22_10845) lmrP 2124545..2125771 (-) 1227 Protein_2094 multidrug efflux MFS transporter LmrP -
  LLA22_RS10790 (LLA22_10850) - 2125959..2126453 (+) 495 WP_015082948.1 RNA polymerase sigma factor -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 37412.05 Da        Isoelectric Point: 9.8499

>NTDB_id=847451 LLA22_RS10765 WP_396418192.1 2120973..2122004(-) (sepM) [Lactococcus cremoris strain A.2.2]
MKKKNKKISPKLKWGISIGLIIVALLVLVYPTNYYVEMPGTTEPLGKMVKVEGKKDEHKGDFFLTTVQIARANLATMIYS
HFNSFTSIYSEQEMTGGLNDAQFNRVNQFYMETAQNTAVYQAFKLANKPYELKYEGVYVLDIAKNSTFKNKLELSDTITA
VNGEEFKSSADMIAYVSKQKVGDSVTIEYTRIDGSKHKSTGKYIKIANGKTGIGIGLVDHTEVVTDPKVTLNAGSIGGPS
AGIMFTLEIYSQLTGKDLRGGREIAGTGTIEHDGSIGQIGGVDKKVATASKEGAKVFLVPDSGTKKESSNNYLGAKAAAK
KLKTKMKIVPVKTIQDALDYLEK

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=847451 LLA22_RS10765 WP_396418192.1 2120973..2122004(-) (sepM) [Lactococcus cremoris strain A.2.2]
ATGAAGAAAAAAAATAAAAAAATCAGTCCCAAATTAAAATGGGGCATCTCTATTGGTCTGATTATTGTCGCTCTCCTTGT
TTTAGTGTATCCAACAAATTACTATGTGGAAATGCCTGGAACAACCGAGCCATTAGGAAAAATGGTCAAAGTCGAAGGAA
AAAAAGATGAGCACAAAGGTGACTTTTTCCTTACTACCGTTCAAATTGCGCGCGCTAATCTTGCCACAATGATTTACAGT
CATTTTAATAGTTTTACAAGCATTTACAGTGAACAAGAAATGACCGGTGGCCTTAATGATGCGCAGTTCAATCGTGTCAA
CCAGTTTTACATGGAAACGGCACAAAATACAGCCGTTTATCAGGCCTTCAAGTTGGCAAATAAACCCTATGAACTGAAAT
ATGAAGGGGTTTATGTCCTTGATATCGCTAAAAATTCGACTTTTAAAAATAAATTGGAACTTTCGGACACGATTACAGCA
GTCAATGGGGAAGAATTTAAATCAAGTGCAGATATGATTGCTTACGTTTCGAAGCAAAAAGTCGGCGATTCAGTTACCAT
TGAATATACACGGATTGATGGAAGTAAACACAAGTCTACTGGAAAATATATCAAAATCGCTAATGGAAAAACTGGAATCG
GAATTGGACTAGTTGACCATACTGAAGTAGTCACAGACCCAAAAGTTACACTCAATGCAGGTTCAATCGGTGGACCATCT
GCCGGAATAATGTTTACACTAGAGATTTACAGTCAGTTGACAGGTAAAGATTTACGTGGTGGTCGCGAAATAGCAGGAAC
TGGAACGATTGAACATGATGGAAGCATTGGCCAAATCGGTGGGGTTGATAAAAAAGTAGCTACTGCTAGCAAAGAAGGCG
CAAAAGTTTTCTTAGTTCCTGACTCAGGCACCAAAAAAGAAAGCAGCAATAACTATCTTGGAGCCAAAGCAGCCGCTAAA
AAATTAAAAACGAAGATGAAAATTGTTCCCGTCAAGACTATTCAGGACGCTTTAGATTATTTAGAAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

48.696

100

0.49