Detailed information NTG0847108

Bioinformatically predicted

Overview

• Name: recG/mmsA
• Type: Machinery gene
• Locus tag: VM636_RS08660
• Genome accession: NZ_CP144555
• Coordinates: 2023275..2025503 (-)
• Length: 742 a.a.
• NCBI ID: WP_338484244.1
• Uniprot ID: -
• Organism: Streptomyces sp. SCSIO 75703
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2018275..2030503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VM636_RS08630 (VM636_08630)	rnc	2018965..2019807 (-)	843	WP_030421538.1	ribonuclease III	-
VM636_RS08635 (VM636_08635)	rpmF	2019827..2020000 (-)	174	WP_003951102.1	50S ribosomal protein L32	-
VM636_RS08640 (VM636_08640)	-	2020006..2020656 (-)	651	WP_030421537.1	DUF177 domain-containing protein	-
VM636_RS08645 (VM636_08645)	-	2020816..2021976 (-)	1161	WP_030421536.1	ATP synthase F0 subunit B	-
VM636_RS08650 (VM636_08650)	coaD	2022097..2022576 (-)	480	WP_030421535.1	pantetheine-phosphate adenylyltransferase	-
VM636_RS08655 (VM636_08655)	rsmD	2022603..2023190 (-)	588	WP_030421534.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
VM636_RS08660 (VM636_08660)	recG/mmsA	2023275..2025503 (-)	2229	WP_338484244.1	ATP-dependent DNA helicase RecG	Machinery gene
VM636_RS08665 (VM636_08665)	-	2025689..2027590 (-)	1902	WP_338484245.1	DAK2 domain-containing protein	-
VM636_RS08670 (VM636_08670)	rpmB	2027854..2028039 (+)	186	WP_003993230.1	50S ribosomal protein L28	-
VM636_RS08675 (VM636_08675)	thiD	2028120..2028917 (-)	798	WP_030421531.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
VM636_RS08680 (VM636_08680)	-	2028914..2029882 (-)	969	WP_030421530.1	thiamine-phosphate kinase	-
VM636_RS08685 (VM636_08685)	-	2030107..2030340 (+)	234	WP_030421529.1	Lrp/AsnC ligand binding domain-containing protein	-

Sequence

Protein

• Length: 742 a.a.
• Molecular weight: 80098.55 Da
• Isoelectric Point: 6.4544

>NTDB_id=847108 VM636_RS08660 WP_338484244.1 2023275..2025503(-) (recG/mmsA) [Streptomyces sp. SCSIO 75703]
MDLVPAQRQTLDQPLKSVLGPATAKVMAEHLGLHTVGDLLHHYPRRYEERGQLTHLADLPMDEHVTVVAQVADARLHTFA
SSRAPRGKGQRLEVTITDGSGRLQLVFFGNGVHKPHKELLPGTRAMFAGKVSVFNRRLQLAHPAYAPLRGDGEDGEEAAE
SWAGSLIPLYPATAKLESWKIAKAVQTVLPSAGEALDPLPEALREGRGMLPLPEALHKIHRPHTKADVEEARARLKWDEA
FVLQVALARRRHAETQLPAVPRRPRPDGLLTAFDARLPFTLTEGQRTVSREIFDDLATDHPMHRLLQGEVGSGKTMVALR
AMLAVVDAGGQAAMLAPTEVLAQQHHRSIVEMMGELAEGGMLGGAENATKVVLLTGSMGAAARRRALLDLTTGEAGIVIG
THALIEDKVRFHDLGLVVVDEQHRFGVEQRDALRGKGTQPPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPISS
HVVPAADKPHFLARAWERVREEVSQGHQAYVVCPRIGDEDEDPGKRKPPADAQGDDAKRPPLAVLEVAGHLAEGPLAGLR
VEILHGRMPPDDKDAVMRRFAAGETDVLVATTVIEVGVNVPNATAMVIMDADRFGVSQLHQLRGRVGRGSAPGLCLLVTE
APPASGARQRLDAVAATLDGFALSRVDLEQRREGDVLGQAQSGARSSLRVLAVIEDEEIIAEAREEAAALVAADPDLTRL
PGLRTALDALLDAEREQYLEKG

Nucleotide

• Length: 2229 bp

>NTDB_id=847108 VM636_RS08660 WP_338484244.1 2023275..2025503(-) (recG/mmsA) [Streptomyces sp. SCSIO 75703]
ATGGATCTCGTGCCCGCACAGCGACAGACCCTCGACCAGCCCCTGAAGTCGGTGCTCGGCCCCGCCACCGCGAAGGTGAT
GGCCGAGCACCTCGGCCTGCACACCGTCGGCGACCTCCTCCACCACTACCCCCGCCGGTACGAGGAGCGCGGACAGCTCA
CCCACCTCGCCGACCTCCCCATGGACGAGCACGTCACGGTCGTCGCCCAGGTCGCCGACGCCCGGCTGCACACCTTCGCC
TCCTCCCGGGCCCCGCGCGGCAAGGGACAGCGCCTGGAGGTGACCATCACGGACGGCAGCGGCCGGCTCCAGCTCGTCTT
CTTCGGCAACGGCGTGCACAAGCCCCACAAGGAACTGCTGCCCGGCACCCGCGCGATGTTCGCCGGCAAGGTCTCCGTCT
TCAACCGCCGCCTCCAGCTCGCCCACCCCGCCTACGCGCCGCTGCGCGGCGACGGCGAGGACGGCGAGGAAGCCGCCGAG
TCCTGGGCGGGCTCCCTCATCCCGCTCTACCCGGCCACCGCCAAACTGGAGTCCTGGAAGATCGCCAAGGCGGTCCAGAC
CGTCCTGCCCAGCGCCGGCGAGGCCCTCGACCCGCTCCCCGAGGCCCTGCGCGAGGGCCGCGGAATGCTCCCGCTCCCCG
AGGCACTGCACAAGATCCACCGCCCGCACACCAAGGCCGACGTGGAGGAGGCCCGCGCCCGCCTGAAGTGGGACGAGGCG
TTCGTCCTCCAGGTCGCCCTGGCCCGCCGCCGCCACGCCGAGACCCAGCTCCCCGCCGTCCCCCGCCGCCCCCGGCCCGA
CGGCCTGCTCACCGCCTTCGACGCCCGGCTGCCCTTCACCCTCACCGAGGGCCAGCGCACCGTCTCCCGCGAGATCTTCG
ACGACCTCGCCACCGACCACCCCATGCACCGCCTGCTCCAGGGCGAGGTCGGCTCCGGCAAGACCATGGTCGCCCTGCGC
GCCATGCTCGCCGTCGTCGACGCCGGGGGGCAGGCCGCGATGCTGGCGCCCACCGAGGTCCTCGCCCAGCAGCACCACCG
CTCGATCGTCGAGATGATGGGGGAGCTGGCCGAGGGCGGCATGCTCGGCGGCGCCGAGAACGCCACCAAGGTCGTCCTGC
TCACCGGCTCCATGGGCGCCGCCGCCCGCCGCCGCGCCCTGCTCGACCTGACCACCGGCGAGGCCGGCATCGTCATCGGC
ACCCACGCCCTGATCGAGGACAAGGTCCGCTTCCACGACCTGGGCCTCGTCGTCGTCGACGAACAGCACCGCTTCGGCGT
CGAGCAGCGCGACGCCCTGCGCGGCAAGGGCACCCAGCCCCCCCACCTGCTCGTCATGACCGCCACGCCCATCCCGCGCA
CCGTCGCCATGACCGTCTTCGGCGACCTGGAGACCTCCGTCCTGGACCAGCTCCCGGCCGGCCGCTCCCCGATCTCCAGT
CACGTCGTCCCCGCCGCCGACAAACCGCACTTCCTCGCCCGTGCCTGGGAACGGGTCCGCGAGGAGGTCTCCCAGGGCCA
CCAGGCGTACGTCGTCTGCCCCCGCATCGGCGACGAGGACGAGGACCCCGGAAAGCGCAAACCGCCCGCCGACGCCCAGG
GCGACGACGCGAAACGGCCCCCGCTCGCCGTCCTGGAGGTCGCCGGACACCTCGCCGAGGGCCCCCTCGCGGGCCTGCGC
GTCGAGATCCTGCACGGCCGGATGCCCCCCGACGACAAGGACGCCGTCATGCGCCGCTTCGCCGCCGGCGAGACCGACGT
CCTGGTGGCTACCACCGTCATCGAGGTCGGCGTCAACGTCCCGAACGCCACGGCGATGGTCATCATGGACGCCGACCGCT
TCGGCGTCTCCCAGCTCCACCAGTTGCGCGGCCGGGTCGGACGCGGCTCCGCCCCCGGCCTGTGCCTGCTGGTCACCGAG
GCGCCCCCGGCGAGCGGGGCCCGGCAGCGCCTGGACGCCGTCGCCGCCACCCTCGACGGCTTCGCGCTCTCCCGCGTCGA
CCTGGAACAGCGCCGCGAGGGCGACGTCCTCGGCCAGGCCCAGTCCGGCGCCCGCAGTTCGCTGCGCGTCCTCGCCGTCA
TCGAGGACGAGGAGATCATCGCCGAGGCCCGCGAGGAGGCCGCGGCCCTGGTCGCCGCCGACCCGGACCTCACCCGGCTG
CCCGGACTGCGCACCGCGCTGGACGCGCTCCTGGACGCGGAACGGGAGCAGTACCTGGAGAAGGGCTGA

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (304-455)

• ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C) (657-718)

• Helicase conserved C-terminal domain (Helicase_C) (558-629)

• OB-fold nucleic acid binding domain (tRNA_anti-codon) (65-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recG/mmsA	Streptococcus pneumoniae R6	37.709	96.496	0.364
recG/mmsA	Streptococcus pneumoniae R36A	37.709	96.496	0.364