Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | K5602_RS07535 | Genome accession | NZ_AP024315 |
| Coordinates | 1593785..1594084 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain BDH17 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1588785..1599084
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5602_RS07510 (BDH17TP_14460) | gcvPA | 1589997..1591343 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| K5602_RS07515 (BDH17TP_14470) | gcvT | 1591363..1592454 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| K5602_RS07520 (BDH17TP_14480) | - | 1592613..1593137 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| K5602_RS07525 | - | 1593127..1593273 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| K5602_RS07530 (BDH17TP_14490) | comGF | 1593370..1593867 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| K5602_RS07535 (BDH17TP_14500) | comGE | 1593785..1594084 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| K5602_RS07540 (BDH17TP_14510) | comGD | 1594071..1594517 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| K5602_RS07545 (BDH17TP_14520) | comGC | 1594495..1594806 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| K5602_RS07550 (BDH17TP_14530) | comGB | 1594820..1595890 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| K5602_RS07555 (BDH17TP_14540) | comGA | 1595862..1596836 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| K5602_RS07560 (BDH17TP_14550) | - | 1596888..1597511 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| K5602_RS07565 (BDH17TP_14560) | - | 1597508..1597837 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| K5602_RS07570 (BDH17TP_14570) | - | 1597837..1598823 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| K5602_RS07575 (BDH17TP_14580) | - | 1598820..1599023 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=84707 K5602_RS07535 WP_000844413.1 1593785..1594084(-) (comGE) [Staphylococcus aureus strain BDH17]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=84707 K5602_RS07535 WP_000844413.1 1593785..1594084(-) (comGE) [Staphylococcus aureus strain BDH17]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |