Detailed information NTG0847020

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VZC43_RS00880
• Genome accession: NZ_CP144364
• Coordinates: 181749..182732 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain H106
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 176749..187732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VZC43_RS00860 (VZC43_00860)	dppA	177892..179499 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
VZC43_RS00870 (VZC43_00870)	dppB	179807..180826 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VZC43_RS00875 (VZC43_00875)	dppC	180836..181738 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VZC43_RS00880 (VZC43_00880)	amiE	181749..182732 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
VZC43_RS00885 (VZC43_00885)	dppF	182729..183733 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VZC43_RS00890 (VZC43_00890)	yhjV	183763..185034 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
VZC43_RS00895 (VZC43_00895)	ldrD	185510..185617 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
VZC43_RS00900 (VZC43_00900)	bcsG	185704..187383 (-)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
VZC43_RS00905 (VZC43_00905)	bcsF	187380..187571 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=847020 VZC43_RS00880 WP_001196486.1 181749..182732(+) (amiE) [Escherichia coli strain H106]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=847020 VZC43_RS00880 WP_001196486.1 181749..182732(+) (amiE) [Escherichia coli strain H106]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404