Detailed information NTG0846972

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: V2H88_RS01325
• Genome accession: NZ_CP144351
• Coordinates: 292964..295789 (-)
• Length: 941 a.a.
• NCBI ID: WP_064964513.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain RA-3M
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 287964..300789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V2H88_RS01310 (V2H88_01310)	-	290189..290722 (+)	534	WP_004918921.1	hypothetical protein	-
V2H88_RS01315 (V2H88_01315)	purH	290822..292336 (-)	1515	WP_004918920.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
V2H88_RS01320 (V2H88_01320)	-	292356..292940 (-)	585	WP_004918918.1	outer membrane beta-barrel protein	-
V2H88_RS01325 (V2H88_01325)	uvrA	292964..295789 (-)	2826	WP_064964513.1	excinuclease ABC subunit UvrA	Machinery gene
V2H88_RS01330 (V2H88_01330)	-	295913..296857 (-)	945	WP_004918915.1	SPFH domain-containing protein	-
V2H88_RS01335 (V2H88_01335)	rpsA	297188..298969 (+)	1782	WP_004918909.1	30S ribosomal protein S1	-
V2H88_RS01340 (V2H88_01340)	-	299187..300383 (-)	1197	WP_004918907.1	aminopeptidase C	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 105497.22 Da
• Isoelectric Point: 7.5093

>NTDB_id=846972 V2H88_RS01325 WP_064964513.1 292964..295789(-) (uvrA) [Riemerella anatipestifer strain RA-3M]
MMKNRDFIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARRFLGGLERPDVDKI
EGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVSTAYSLETGKKLQSYTEEQILETIKEQYQNEKVLLLAPLVK
ARKGHYHELFVQLAKKGYSQARIDGTLQDIEYDLKLDRYKTHDIEVVIDRWIIGETASEARMQKSLSTALQMGGGVVMVQ
KYNSEEFQYFSKDLMDTATGQALPLPEPNTFSFNSPKGSCPHCKGLGTVKKINPDYLVTEPTLPFQSALLPLETYKFSKW
ALSQIKSILELFDLNLQTPFNKIPKEALDYIYYGCDKEFVKDLKHAGISKKTKINFEGLIPHLEKVIEDKENYGATQVER
EFTVEEICTDCNGTRLKPESLAFKIEGKNIAEVNAMSLLDLKDWLSEIKNSFSEKNKIIAHEILKEIETRLGFLLDVGLE
YLSLSRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKSLRDLGNSVLVVEHDKDMILEADE
VLDIGPKAGKYGGKVLWQGSPKDLIKADTITADYLTGRRKIEIPEKRREGNGNEIVLKGATGNNLKNVTLKIPLGKMVVV
TGISGSGKSSLINGTLYPILNRHFYRAVQEPLPYEKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGVFSDIRTLFANLP
ESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEVRYKGKSISDVLDMTIDEAVEF
FQPIPKIYSKVKTLQEVGLGYITLGQQSTTLSGGEAQRVKLATELSKKQTGKTLYILDEPTTGLHFEDVKILMEVIQKLV
DLGNSFIIIEHNMDVIKLADHIIDVGPEGGKNGGSIVAEGTPEEIIKNKKSITGKFLKKEM

Nucleotide

• Length: 2826 bp

>NTDB_id=846972 V2H88_RS01325 WP_064964513.1 292964..295789(-) (uvrA) [Riemerella anatipestifer strain RA-3M]
ATGATGAAAAATAGAGATTTCATAGAGGTCTATGGTGCTAGAGAGCATAACTTAAAAAACATTGATGTTAAAATTCCTCG
TAACGAGTTAGTCGTTATTACAGGGCTATCAGGAAGTGGGAAATCTTCTTTAGCATTTGATACTATTTTTGCAGAAGGAC
AAAGGCGTTATATAGAAACATTTTCCGCCTATGCTCGGCGGTTTCTAGGTGGATTAGAACGCCCCGATGTTGATAAAATA
GAAGGACTTTCCCCTGTTATCGCTATTGAACAAAAAACCACTAATAAAAACCCTCGTTCTACCGTAGGGACGGTTACAGA
ACTTTATGATTTTCTCAGACTTCTATTTGCTAGAGTTTCCACAGCTTATTCCTTAGAAACAGGTAAAAAGCTACAAAGCT
ATACCGAAGAGCAAATTTTAGAAACCATCAAAGAACAATATCAGAATGAAAAAGTCTTGCTTCTAGCACCGCTAGTAAAG
GCTAGAAAGGGGCATTATCACGAGCTTTTTGTGCAATTAGCCAAAAAAGGATATTCCCAAGCAAGAATAGATGGCACTTT
GCAAGATATAGAATACGACCTTAAACTAGACCGATACAAAACCCACGATATAGAAGTAGTTATAGACCGTTGGATTATAG
GCGAAACCGCATCTGAAGCTAGGATGCAAAAATCACTTTCCACAGCTTTGCAGATGGGGGGTGGTGTGGTTATGGTTCAA
AAATATAATTCGGAAGAGTTTCAGTATTTTTCTAAAGATTTAATGGATACCGCCACAGGACAGGCTCTACCATTACCAGA
ACCAAATACTTTTTCGTTCAATTCTCCTAAAGGGAGTTGTCCTCATTGTAAAGGTTTGGGAACTGTAAAAAAAATCAATC
CTGATTATCTAGTTACCGAGCCTACTCTACCCTTTCAGTCGGCACTATTACCATTAGAAACTTATAAATTTAGTAAATGG
GCTTTATCTCAAATTAAAAGCATTCTAGAATTATTTGACCTTAACCTACAAACACCATTCAACAAAATTCCTAAAGAAGC
CTTAGACTACATCTATTACGGTTGTGATAAAGAGTTTGTAAAAGATTTAAAACACGCTGGAATTTCCAAAAAAACTAAAA
TTAACTTTGAAGGGCTAATCCCTCATTTAGAAAAAGTTATAGAAGATAAAGAGAACTACGGTGCTACACAAGTGGAACGA
GAGTTTACAGTAGAAGAAATCTGTACGGACTGTAACGGAACAAGATTAAAACCCGAAAGTTTAGCCTTTAAAATAGAAGG
TAAGAATATAGCTGAAGTTAATGCGATGAGCTTATTAGACTTAAAAGATTGGCTTTCGGAAATAAAAAATAGCTTTAGCG
AAAAAAACAAAATTATCGCCCACGAAATTTTAAAAGAGATAGAAACTCGTTTGGGCTTTTTATTAGACGTAGGGCTAGAA
TATCTTAGTCTTAGTAGAAGTAGTAAAACCCTTTCTGGAGGCGAATCCCAAAGGATTCGTTTGGCAACTCAGATAGGTTC
GCAGTTGGTGAATGTCCTTTATATTTTAGACGAACCTTCTATTGGGCTTCACCAGAGAGATAACGAAAGACTTATCAACT
CTTTAAAAAGTTTACGAGATTTAGGAAACTCTGTTCTTGTGGTGGAACACGATAAGGATATGATTTTGGAAGCCGATGAA
GTGCTAGACATCGGACCTAAAGCAGGTAAATATGGCGGAAAAGTCTTGTGGCAAGGCAGCCCAAAAGATTTAATAAAAGC
TGATACCATTACAGCAGATTACCTCACAGGAAGAAGAAAAATAGAAATTCCCGAAAAGAGAAGAGAAGGCAATGGTAATG
AGATTGTCCTCAAAGGAGCTACGGGCAATAATCTTAAAAATGTAACTCTAAAAATTCCTTTAGGGAAGATGGTTGTAGTT
ACGGGGATTTCGGGAAGTGGAAAATCCTCGCTAATCAACGGAACTCTCTACCCTATTCTTAACCGACATTTCTACCGTGC
TGTGCAAGAGCCTCTACCTTACGAAAAGATAGAAGGTATAGAGCATATAGACAAAATAGTAGATGTAGACCAAACGCCCA
TCGGTAGAACGCCTCGTTCTAACCCTGCTACTTACACAGGTGTATTTTCGGATATCCGAACCTTGTTCGCTAACCTTCCA
GAAAGTAAAATCAGAGGTTATAAGGCAGGGAGGTTTTCGTTTAATGTTAAAGGTGGACGCTGCGAAACTTGTCAAGGAGG
TGGTTTGAAAGTGATTGAAATGAATTTCTTGCCTGATGTCTATGTACATTGCGAAACCTGCAACGGCAAACGCTTTAATA
GAGAGACCTTGGAGGTAAGATATAAAGGTAAATCTATATCCGATGTCCTAGATATGACTATAGACGAAGCTGTGGAATTT
TTTCAGCCAATCCCCAAAATCTATTCTAAGGTGAAAACGCTACAAGAAGTTGGTTTAGGTTATATTACCTTAGGACAACA
GTCTACTACACTTTCAGGCGGAGAGGCTCAAAGGGTAAAATTGGCTACAGAACTTTCTAAGAAACAAACAGGTAAAACAC
TTTATATCTTAGATGAACCTACCACAGGACTGCATTTTGAAGATGTTAAGATTCTGATGGAGGTTATCCAAAAGCTAGTA
GATTTGGGTAACTCTTTTATCATTATTGAACATAATATGGACGTGATAAAACTTGCCGACCATATTATAGATGTAGGTCC
AGAAGGTGGTAAAAATGGAGGAAGCATTGTGGCAGAAGGTACTCCAGAAGAAATTATAAAGAATAAAAAATCTATCACAG
GTAAATTTTTGAAAAAAGAAATGTAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-391)

• UvrA interaction domain (UvrA_inter) (135-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	51.589	100	0.518
uvrA	Streptococcus pneumoniae TIGR4	51.589	100	0.518
uvrA	Streptococcus pneumoniae D39	51.589	100	0.518